RNA id: TU1933741



Basic Information


Item Value
RNA id TU1933741
length 293
lncRNA type intronic
GC content 0.41
exon number 1
gene id G1690667
representative True

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36743939 ~ 36744231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tttctagtttagtggtgctatgttgtcaaatcctcccatgtttctagtttagtggtgctatgttgtcaaatcctcccatgtttctagtttagtggtgctatgctgtcaaatcctcccatgtttctagtttagtggtgcTATGTTGTCAAAACCtcccatgtttctagtttagtggtgctatgctgtcaaatcctcccatgtttctagtttagtggtgctatgctgtcaaatcctcccatgtttctagtttagtggtgctgtgttgtcaaatcctcccatgtttctagtttagt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1933740 lncRNA downstream 2016 36741586 ~ 36741923 (-) True G1690666
TU1933739 lncRNA downstream 3233 36740452 ~ 36740706 (-) True G1690665
TU1933733 lncRNA downstream 12019 36731668 ~ 36731920 (-) True G1690659
TU1933732 lncRNA downstream 13072 36730666 ~ 36730867 (-) True G1690658
TU1933725 lncRNA downstream 33867 36709742 ~ 36710072 (-) True G1690652
TU1933743 lncRNA upstream 4050 36748281 ~ 36748522 (-) True G1690669
TU1933746 lncRNA upstream 14167 36758398 ~ 36758600 (-) True G1690672
TU1933767 lncRNA upstream 49752 36793983 ~ 36794632 (-) True G1690692
TU1933768 lncRNA upstream 54502 36798733 ~ 36799024 (-) True G1690693
TU1933769 lncRNA upstream 59590 36803821 ~ 36804109 (-) True G1690694
XM_021576579.2 mRNA downstream 151175 36583534 ~ 36592764 (-) True LOC110499436
XM_036956292.1 mRNA downstream 356267 36344254 ~ 36387672 (-) False LOC110499433
XM_036956293.1 mRNA downstream 356267 36344254 ~ 36387672 (-) True LOC110499433
XM_036956291.1 mRNA downstream 356270 36344254 ~ 36387669 (-) False LOC110499433
XM_036956287.1 mRNA downstream 407487 36259840 ~ 36336452 (-) False LOC110499540
XM_021576581.2 mRNA upstream 147615 36891846 ~ 36896982 (-) False LOC110499438
XM_021576582.2 mRNA upstream 175947 36920178 ~ 36935086 (-) True LOC110499441
XR_005038406.1 mRNA upstream 202035 36946266 ~ 36946381 (-) True LOC118942469
XM_036956298.1 mRNA upstream 311722 37055953 ~ 37197139 (-) False LOC110499443
XM_036956299.1 mRNA upstream 333813 37078044 ~ 37197139 (-) False LOC110499443
TU1933722 other downstream 40498 36702546 ~ 36703441 (-) True G1690649
TU1933425 other downstream 323339 36419716 ~ 36420600 (-) True G1690367
TU1932968 other downstream 618541 36120507 ~ 36125398 (-) False LOC110499427
TU1933771 other upstream 65468 36809699 ~ 36810143 (-) True G1690696
TU1933942 other upstream 149316 36893547 ~ 36896206 (-) True LOC110499438
TU1934589 other upstream 494596 37238827 ~ 37239310 (-) True G1691432
TU1935552 other upstream 1738664 38482895 ~ 38485362 (-) True G1692288
TU1935564 other upstream 1745319 38489550 ~ 38492040 (-) True oxld1

Expression Profile