RNA id: TU1934303


Basic Information

Item Value
RNA id TU1934303
length 297
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G1691166
representative True

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 37603325 ~ 37603621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagacagacagacagacagacagacagacagacagacagacagacaggcagacaggcagacaggcagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaggcagacaggcagacagacaggcagacaggcagacagacagacagacagacagacagacagacagacagacagacaggcagacaggcagacagacagacagacagacagacagacagacagacagacagacagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1934288 lncRNA upstream 43526 37559531 ~ 37559799 (+) True G1691151
TU1934287 lncRNA upstream 44123 37558921 ~ 37559202 (+) True G1691150
TU1934278 lncRNA upstream 59564 37543551 ~ 37543761 (+) True G1691143
TU1934276 lncRNA upstream 62169 37540821 ~ 37541156 (+) True G1691141
TU1934269 lncRNA upstream 70181 37532925 ~ 37533144 (+) True G1691134
TU1934305 lncRNA downstream 7916 37611537 ~ 37613518 (+) True G1691168
TU1934307 lncRNA downstream 17223 37620844 ~ 37621054 (+) True G1691170
TU1934318 lncRNA downstream 24318 37627939 ~ 37628366 (+) True G1691176
TU1934414 lncRNA downstream 200922 37804543 ~ 37804902 (+) False G1691267
TU1934435 lncRNA downstream 239533 37843154 ~ 37843471 (+) True G1691287
XM_021576583.2 mRNA upstream 617765 36965177 ~ 36985560 (+) True LOC110499442
XR_005038404.1 mRNA upstream 684674 36918536 ~ 36918651 (+) True LOC118942467
XR_002469960.2 mRNA upstream 687138 36914324 ~ 36916187 (+) True LOC110499440
XR_005038001.1 mRNA upstream 693755 36906650 ~ 36909570 (+) False LOC118942068
XM_021576585.2 mRNA downstream 472352 38075973 ~ 38081270 (+) True LOC110499446
XM_036956302.1 mRNA downstream 480274 38083895 ~ 38203970 (+) False LOC110499447
XM_036956304.1 mRNA downstream 480274 38083895 ~ 38203970 (+) False LOC110499447
XM_036956303.1 mRNA downstream 480275 38083896 ~ 38203970 (+) False LOC110499447
XM_036956305.1 mRNA downstream 480275 38083896 ~ 38203970 (+) True LOC110499447
TU1934277 other upstream 60060 37541920 ~ 37543265 (+) True G1691142
TU1933843 other upstream 722587 36878051 ~ 36880738 (+) True G1690753
TU1933112 other upstream 1290627 36304939 ~ 36312698 (+) False G1690116
TU1933113 other upstream 1290627 36304939 ~ 36312698 (+) True G1690116
TU1933095 other upstream 1327382 36275482 ~ 36275943 (+) True G1690099
TU1934332 other downstream 47005 37650626 ~ 37654064 (+) True G1691189
TU1934415 other downstream 200922 37804543 ~ 37809061 (+) True G1691267
TU1935199 other downstream 618884 38222505 ~ 38222735 (+) True G1691990
TU1935201 other downstream 624394 38228015 ~ 38228551 (+) True G1691992
TU1935683 other downstream 964648 38568269 ~ 38569446 (+) True G1692406

Expression Profile