Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1940522 |
| length | 338 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G1696458 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 42938401 ~ 42940278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1940508 | lncRNA | upstream | 21505 | 42916295 ~ 42916896 (+) | True | G1696448 |
| TU1940504 | lncRNA | upstream | 28489 | 42904267 ~ 42909912 (+) | True | G1696447 |
| TU1940466 | lncRNA | upstream | 57535 | 42880521 ~ 42880866 (+) | True | G1696423 |
| TU1940461 | lncRNA | upstream | 83421 | 42854754 ~ 42854980 (+) | True | G1696418 |
| TU1940452 | lncRNA | upstream | 96386 | 42841812 ~ 42842015 (+) | True | G1696409 |
| TU1940549 | lncRNA | downstream | 51650 | 42991224 ~ 43040351 (+) | True | G1696477 |
| TU1940555 | lncRNA | downstream | 58471 | 42998045 ~ 43083597 (+) | False | G1696481 |
| TU1940554 | lncRNA | downstream | 58739 | 42998313 ~ 43000342 (+) | True | G1696481 |
| TU1940562 | lncRNA | downstream | 62779 | 43002353 ~ 43002809 (+) | True | G1696484 |
| TU1940571 | lncRNA | downstream | 73792 | 43013366 ~ 43015317 (+) | True | G1696493 |
| XM_036955561.1 | mRNA | upstream | 86662 | 42846046 ~ 42851739 (+) | True | tbxtb |
| XR_005038026.1 | mRNA | upstream | 111309 | 42803589 ~ 42827092 (+) | False | LOC118942075 |
| XM_036956384.1 | mRNA | upstream | 111309 | 42821797 ~ 42827092 (+) | False | LOC118942075 |
| XM_021576633.2 | mRNA | upstream | 164292 | 42745164 ~ 42774109 (+) | False | LOC110499501 |
| XM_036955568.1 | mRNA | upstream | 278391 | 42655757 ~ 42660010 (+) | True | LOC110499499 |
| XM_036956385.1 | mRNA | downstream | 11375 | 42950949 ~ 43121895 (+) | False | LOC110499502 |
| XM_036956387.1 | mRNA | downstream | 197814 | 43137388 ~ 43148369 (+) | False | LOC110499564 |
| XM_036956388.1 | mRNA | downstream | 197814 | 43137388 ~ 43148369 (+) | False | LOC110499564 |
| XM_036956386.1 | mRNA | downstream | 197815 | 43137389 ~ 43148369 (+) | False | LOC110499564 |
| XM_036955569.1 | mRNA | downstream | 432119 | 43371693 ~ 43402764 (+) | True | LOC110510394 |
| TU1940344 | other | upstream | 157852 | 42779999 ~ 42780549 (+) | True | G1696324 |
| TU1939722 | other | upstream | 411393 | 42522510 ~ 42527008 (+) | False | LOC118942073 |
| TU1939742 | other | upstream | 411764 | 42522559 ~ 42526637 (+) | False | LOC118942073 |
| TU1939686 | other | upstream | 427154 | 42509631 ~ 42511247 (+) | True | LOC110499605 |
| TU1938999 | other | upstream | 1319896 | 41618027 ~ 41618505 (+) | True | G1695272 |
| TU1940630 | other | downstream | 194053 | 43133627 ~ 43134013 (+) | True | G1696541 |
| TU1940489 | other | downstream | 197819 | 43137393 ~ 43138115 (+) | True | LOC110499564 |
| TU1940662 | other | downstream | 267985 | 43207559 ~ 43209518 (+) | True | G1696563 |
| TU1941117 | other | downstream | 683910 | 43623484 ~ 43626360 (+) | True | G1696904 |
| TU1941123 | other | downstream | 686814 | 43626388 ~ 43661355 (+) | True | G1696905 |
