Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001281404.1 |
| length | 1334 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 12 |
| gene id | irak3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 3543652 ~ 3562592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| id | description |
|---|---|
| K04732 | IRAK3; interleukin-1 receptor-associated kinase 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1947333 | lncRNA | upstream | 823 | 3542628 ~ 3542829 (+) | True | G1701532 |
| TU1947332 | lncRNA | upstream | 1179 | 3542242 ~ 3542473 (+) | True | G1701531 |
| TU1947328 | lncRNA | upstream | 15995 | 3527447 ~ 3527657 (+) | True | G1701527 |
| TU1947325 | lncRNA | upstream | 20589 | 3522631 ~ 3523063 (+) | True | G1701524 |
| TU1947321 | lncRNA | upstream | 21831 | 3521294 ~ 3521821 (+) | True | G1701523 |
| TU1947349 | lncRNA | downstream | 20991 | 3583583 ~ 3586176 (+) | True | G1701538 |
| TU1947372 | lncRNA | downstream | 84744 | 3647336 ~ 3647677 (+) | True | G1701560 |
| TU1947403 | lncRNA | downstream | 200227 | 3762819 ~ 3763192 (+) | True | G1701591 |
| TU1947412 | lncRNA | downstream | 208898 | 3771490 ~ 3772245 (+) | True | G1701595 |
| TU1947429 | lncRNA | downstream | 227365 | 3789957 ~ 3790933 (+) | True | G1701602 |
| XM_036956615.1 | mRNA | upstream | 152058 | 3385456 ~ 3391594 (+) | True | LOC110516257 |
| XR_005038456.1 | mRNA | upstream | 306080 | 2819887 ~ 3237572 (+) | True | LOC110499725 |
| XM_036956614.1 | mRNA | upstream | 307296 | 2819887 ~ 3236356 (+) | False | LOC110499725 |
| XM_036958449.1 | mRNA | upstream | 811839 | 2730641 ~ 2731813 (+) | True | LOC118942987 |
| XM_036956612.1 | mRNA | upstream | 876374 | 2588642 ~ 2667278 (+) | False | LOC110519348 |
| XM_036956616.1 | mRNA | downstream | 3047 | 3565639 ~ 3583498 (+) | True | helb |
| XM_036956628.1 | mRNA | downstream | 821424 | 4384016 ~ 4441236 (+) | False | LOC110516816 |
| XM_036956629.1 | mRNA | downstream | 821424 | 4384016 ~ 4441236 (+) | False | LOC110516816 |
| XM_036956630.1 | mRNA | downstream | 821424 | 4384016 ~ 4441236 (+) | False | LOC110516816 |
| XM_036956636.1 | mRNA | downstream | 888524 | 4451116 ~ 4475091 (+) | False | si:dkey-39a18.1 |
| TU1947013 | other | upstream | 694049 | 2844704 ~ 2849603 (+) | False | G1701265 |
| TU1946903 | other | upstream | 890033 | 2639340 ~ 2653619 (+) | False | LOC110519348 |
| TU1945284 | other | upstream | 1674098 | 1867694 ~ 1869554 (+) | False | G1699934 |
| TU1947414 | other | downstream | 211447 | 3774039 ~ 3776261 (+) | True | G1701596 |
| TU1947490 | other | downstream | 370195 | 3932787 ~ 3936037 (+) | False | G1701654 |
| TU1947491 | other | downstream | 370195 | 3932787 ~ 3936037 (+) | False | G1701654 |
| TU1947496 | other | downstream | 371338 | 3933930 ~ 3936037 (+) | False | G1701654 |
| TU1948666 | other | downstream | 821464 | 4384056 ~ 4400981 (+) | True | LOC110516816 |
