RNA id: trnav-uac-23


Basic Information

Item Value
RNA id trnav-uac-23
length 74
RNA type mRNA
GC content 0.57
exon number 1
gene id trnav-uac-23
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4213892 ~ 4213965 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCccttgtagctcagttggtagagcatggtgcttacaACACCAGGGTTGGGGGGTTCGATTCCCCTCAGGGGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1948575 lncRNA downstream 18742 4194469 ~ 4195150 (-) True G1702457
TU1948565 lncRNA downstream 42782 4170257 ~ 4171110 (-) True G1702449
TU1948547 lncRNA downstream 97622 4115184 ~ 4116270 (-) True G1702434
TU1948541 lncRNA downstream 113434 4099507 ~ 4100458 (-) True G1702428
TU1948511 lncRNA downstream 174943 4038479 ~ 4038949 (-) True G1702400
TU1948591 lncRNA upstream 10753 4224718 ~ 4226289 (-) True G1702473
TU1948595 lncRNA upstream 18317 4232282 ~ 4232748 (-) True G1702477
TU1948615 lncRNA upstream 37255 4251220 ~ 4252243 (-) True G1702487
TU1948636 lncRNA upstream 87440 4301405 ~ 4301906 (-) True G1702508
TU1948639 lncRNA upstream 89493 4303458 ~ 4304430 (-) True G1702510
XM_036956618.1 mRNA downstream 215365 3588530 ~ 3998527 (-) False LOC110499739
XM_036956617.1 mRNA downstream 215366 3588530 ~ 3998526 (-) False LOC110499739
XM_036956619.1 mRNA downstream 215366 3588530 ~ 3998526 (-) False LOC110499739
XM_036956621.1 mRNA downstream 215366 3588530 ~ 3998526 (-) False LOC110499739
XM_036956622.1 mRNA downstream 215366 3588530 ~ 3998526 (-) False LOC110499739
XM_036956639.1 mRNA upstream 397917 4611882 ~ 4634155 (-) False LOC110499732
XM_036956637.1 mRNA upstream 397917 4611882 ~ 4634590 (-) False LOC110499732
XR_005038459.1 mRNA upstream 397917 4611882 ~ 4634590 (-) False LOC110499732
XM_036956638.1 mRNA upstream 397917 4611882 ~ 4636535 (-) False LOC110499732
XM_036956640.1 mRNA upstream 478918 4692883 ~ 4704523 (-) False LOC110516460
TU1948253 other downstream 625305 3585864 ~ 3588587 (-) False LOC110499739
TU1948272 other downstream 625305 3585864 ~ 3588587 (-) False LOC110499739
TU1948280 other downstream 625305 3585864 ~ 3588587 (-) False LOC110499739
TU1948153 other downstream 695515 3281102 ~ 3518377 (-) True G1702141
TU1948127 other downstream 983851 3229002 ~ 3230041 (-) True G1702117
TU1949213 other upstream 228284 4442249 ~ 4444919 (-) False G1702914
TU1949475 other upstream 718249 4932214 ~ 4933989 (-) False LOC118936570
TU1949477 other upstream 718249 4932214 ~ 4933989 (-) False LOC118936570
TU1949488 other upstream 718249 4932214 ~ 4933989 (-) False LOC118936570
TU1949528 other upstream 732633 4946598 ~ 4947411 (-) True G1703085