Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1949485 |
| length | 1168 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC118936570 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4932214 ~ 4970391 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1949518 | lncRNA | downstream | 3270 | 4928732 ~ 4929322 (-) | True | G1703080 |
| TU1949517 | lncRNA | downstream | 6672 | 4925637 ~ 4925920 (-) | True | G1703079 |
| TU1949432 | lncRNA | downstream | 74689 | 4857163 ~ 4857903 (-) | False | G1703038 |
| TU1949500 | lncRNA | upstream | 1114 | 4935103 ~ 4935716 (-) | False | G1703064 |
| TU1949499 | lncRNA | upstream | 1302 | 4935291 ~ 4935716 (-) | True | G1703064 |
| TU1949504 | lncRNA | upstream | 24921 | 4958910 ~ 4961893 (-) | True | G1703068 |
| TU1949502 | lncRNA | upstream | 25436 | 4959425 ~ 4960819 (-) | True | G1703066 |
| TU1949501 | lncRNA | upstream | 37385 | 4971374 ~ 4971580 (-) | True | G1703065 |
| NM_001124620.1 | mRNA | downstream | 154511 | 4756753 ~ 4778081 (-) | True | ifng |
| XM_036958450.1 | mRNA | downstream | 203861 | 4723028 ~ 4728731 (-) | True | LOC118942988 |
| XM_036956640.1 | mRNA | downstream | 228069 | 4692883 ~ 4704523 (-) | False | LOC110516460 |
| XM_036956641.1 | mRNA | downstream | 228069 | 4692883 ~ 4704523 (-) | True | LOC110516460 |
| XM_036956638.1 | mRNA | downstream | 296057 | 4611882 ~ 4636535 (-) | False | LOC110499732 |
| XR_005038467.1 | mRNA | upstream | 180 | 4934169 ~ 4970388 (-) | False | LOC118936570 |
| XM_036958452.1 | mRNA | upstream | 118629 | 5052618 ~ 5060318 (-) | True | LOC118942989 |
| XM_036956662.1 | mRNA | upstream | 268825 | 5202814 ~ 5223352 (-) | False | LOC110518655 |
| XM_036956655.1 | mRNA | upstream | 268825 | 5202814 ~ 5223353 (-) | False | LOC110518655 |
| XM_036956658.1 | mRNA | upstream | 268825 | 5202814 ~ 5223353 (-) | False | LOC110518655 |
| TU1949213 | other | downstream | 487673 | 4442249 ~ 4444919 (-) | False | G1702914 |
| TU1948253 | other | downstream | 1344005 | 3585864 ~ 3588587 (-) | False | LOC110499739 |
| TU1948272 | other | downstream | 1344005 | 3585864 ~ 3588587 (-) | False | LOC110499739 |
| TU1948280 | other | downstream | 1344005 | 3585864 ~ 3588587 (-) | False | LOC110499739 |
| TU1948153 | other | downstream | 1414215 | 3281102 ~ 3518377 (-) | True | G1702141 |
| TU1949528 | other | upstream | 12609 | 4946598 ~ 4947411 (-) | True | G1703085 |
| TU1949495 | other | upstream | 27993 | 4961982 ~ 4966019 (-) | False | LOC118936570 |
| TU1949491 | other | upstream | 33591 | 4967580 ~ 4970355 (-) | True | LOC118936570 |
| TU1949687 | other | upstream | 266838 | 5200827 ~ 5202057 (-) | True | G1703190 |
| TU1949706 | other | upstream | 298646 | 5232635 ~ 5235225 (-) | True | G1703200 |
