Item | Value |
---|---|
RNA id | XM_036956649.1 |
length | 1386 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 8 |
gene id | LOC118936571 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 4998226 ~ 5111935 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
id | name | namespace |
---|---|---|
GO:0007507 | heart development | biological_process |
GO:0007264 | small GTPase mediated signal transduction | biological_process |
GO:0006184 | obsolete GTP catabolic process | biological_process |
GO:0060026 | convergent extension | biological_process |
GO:0005829 | cytosol | cellular_component |
GO:0005886 | plasma membrane | cellular_component |
GO:0005911 | cell-cell junction | cellular_component |
GO:0003924 | GTPase activity | molecular_function |
GO:0005525 | GTP binding | molecular_function |
id | description |
---|---|
K07836 | RAP1B; Ras-related protein Rap-1B |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1949063 | lncRNA | upstream | 8177 | 5061603 ~ 5063396 (+) | True | G1702797 |
TU1949058 | lncRNA | upstream | 15823 | 5053565 ~ 5055750 (+) | True | G1702795 |
TU1949057 | lncRNA | upstream | 16263 | 5053162 ~ 5055310 (+) | True | G1702794 |
TU1949055 | lncRNA | upstream | 19410 | 5051010 ~ 5052163 (+) | True | G1702792 |
TU1949022 | lncRNA | upstream | 26451 | 4992407 ~ 5045122 (+) | True | G1702770 |
TU1949078 | lncRNA | downstream | 6201 | 5118136 ~ 5118564 (+) | True | G1702811 |
TU1949080 | lncRNA | downstream | 7709 | 5119644 ~ 5119857 (+) | True | G1702813 |
TU1948981 | lncRNA | downstream | 31709 | 5143644 ~ 5167820 (+) | True | G1702735 |
TU1948986 | lncRNA | downstream | 43931 | 5155866 ~ 5170170 (+) | True | G1702740 |
TU1949090 | lncRNA | downstream | 59579 | 5171514 ~ 5171819 (+) | False | G1702821 |
XR_005038439.1 | mRNA | upstream | 218656 | 4851989 ~ 4852917 (+) | True | LOC118942787 |
XR_005038458.1 | mRNA | upstream | 610002 | 4459746 ~ 4461571 (+) | True | LOC118942831 |
XM_036956632.1 | mRNA | upstream | 611822 | 4451119 ~ 4459751 (+) | False | si:dkey-39a18.1 |
XM_036956650.1 | mRNA | downstream | 8185 | 5120120 ~ 5173429 (+) | True | LOC110490690 |
XM_036956651.1 | mRNA | downstream | 61725 | 5173660 ~ 5179939 (+) | False | LOC118942832 |
XR_005038468.1 | mRNA | downstream | 61725 | 5173660 ~ 5179939 (+) | False | LOC118942832 |
XR_005038469.1 | mRNA | downstream | 61725 | 5173660 ~ 5179939 (+) | True | LOC118942832 |
XR_005038470.1 | mRNA | downstream | 63560 | 5175495 ~ 5176684 (+) | True | LOC118942833 |
TU1949056 | other | upstream | 17109 | 5052447 ~ 5054464 (+) | True | G1702793 |
TU1948666 | other | upstream | 670592 | 4384056 ~ 4400981 (+) | True | LOC110516816 |
TU1948694 | other | upstream | 676058 | 4394993 ~ 4395515 (+) | True | G1702554 |
TU1947490 | other | upstream | 1135536 | 3932787 ~ 3936037 (+) | False | G1701654 |
TU1947491 | other | upstream | 1135536 | 3932787 ~ 3936037 (+) | False | G1701654 |
TU1948974 | other | downstream | 72539 | 5184474 ~ 5188847 (+) | True | LOC110516940 |
TU1949137 | other | downstream | 142230 | 5254165 ~ 5254885 (+) | False | G1702856 |
TU1949138 | other | downstream | 142230 | 5254165 ~ 5254885 (+) | True | G1702856 |
TU1949920 | other | downstream | 473596 | 5585531 ~ 5596428 (+) | True | LOC110511233 |
TU1949988 | other | downstream | 605264 | 5717199 ~ 5717701 (+) | True | G1703391 |