Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021577009.2 |
| length | 967 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | LOC110499950 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 19903585 ~ 19907504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K17423 | MRPL42; large subunit ribosomal protein L42 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1964627 | lncRNA | upstream | 196 | 19903054 ~ 19903389 (+) | True | G1714666 |
| TU1964636 | lncRNA | upstream | 14054 | 19889322 ~ 19889531 (+) | True | G1714675 |
| TU1964635 | lncRNA | upstream | 16259 | 19887064 ~ 19887326 (+) | True | G1714674 |
| TU1964613 | lncRNA | upstream | 51985 | 19849614 ~ 19851600 (+) | True | G1714654 |
| TU1964615 | lncRNA | upstream | 52614 | 19849367 ~ 19850971 (+) | False | G1714654 |
| TU1964640 | lncRNA | downstream | 5343 | 19912847 ~ 19913157 (+) | True | G1714679 |
| TU1964788 | lncRNA | downstream | 65958 | 19973462 ~ 19973841 (+) | False | LOC110499947 |
| TU1964807 | lncRNA | downstream | 88845 | 19996349 ~ 19996552 (+) | True | G1714825 |
| TU1964795 | lncRNA | downstream | 92130 | 19999634 ~ 20000255 (+) | True | G1714813 |
| TU1964808 | lncRNA | downstream | 93420 | 20000924 ~ 20001199 (+) | True | G1714826 |
| XM_036957201.1 | mRNA | upstream | 2778 | 19892477 ~ 19900807 (+) | False | LOC110499945 |
| XM_021577003.2 | mRNA | upstream | 2778 | 19892545 ~ 19900807 (+) | True | LOC110499945 |
| XM_021576996.2 | mRNA | upstream | 17862 | 19861154 ~ 19885723 (+) | False | LOC110499940 |
| XM_021576997.2 | mRNA | upstream | 17862 | 19870615 ~ 19885723 (+) | True | LOC110499940 |
| XM_021576987.2 | mRNA | upstream | 85007 | 19810551 ~ 19818578 (+) | False | LOC110499937 |
| NM_001160651.1 | mRNA | downstream | 195 | 19907699 ~ 19910772 (+) | True | ube2n |
| XM_036957202.1 | mRNA | downstream | 16286 | 19923790 ~ 19934601 (+) | False | LOC110499949 |
| XM_021577008.2 | mRNA | downstream | 16290 | 19923794 ~ 19934601 (+) | True | LOC110499949 |
| XM_021576998.2 | mRNA | downstream | 31947 | 19939451 ~ 19951917 (+) | True | LOC110499941 |
| XM_021577004.2 | mRNA | downstream | 45010 | 19952514 ~ 19956800 (+) | False | LOC110499946 |
| TU1963853 | other | upstream | 279671 | 19602461 ~ 19623914 (+) | False | G1714090 |
| TU1963818 | other | upstream | 279671 | 19617394 ~ 19623914 (+) | False | G1714090 |
| TU1963834 | other | upstream | 315765 | 19580122 ~ 19587820 (+) | False | G1714090 |
| TU1963826 | other | upstream | 375454 | 19486614 ~ 19528131 (+) | False | G1714090 |
| TU1964921 | other | downstream | 201694 | 20109198 ~ 20113891 (+) | True | nmes1 |
| TU1965448 | other | downstream | 650918 | 20558422 ~ 20558751 (+) | True | G1715392 |
| TU1965907 | other | downstream | 1091094 | 20998598 ~ 21000137 (+) | False | LOC110499980 |
| TU1967360 | other | downstream | 2268459 | 22175963 ~ 22180897 (+) | True | G1717161 |
| TU1967725 | other | downstream | 2811415 | 22718919 ~ 22721074 (+) | False | G1717516 |
