Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050564 |
| length | 1335 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | XLOC_025695 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 48221413 ~ 48229972 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016310 | phosphorylation | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041010-192 | Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Orthologous to several human genes including FN3KRP (fructosamine 3 kinase related protein). |
| ensembl_id | ENSDART00000170955 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052779 | lncRNA | upstream | 179500 | 48040338 ~ 48041913 (+) | True | XLOC_025693 |
| TCONS_00052778 | lncRNA | upstream | 723070 | 47494522 ~ 47498343 (+) | False | XLOC_025691 |
| TCONS_00052777 | lncRNA | upstream | 723070 | 47494522 ~ 47498343 (+) | True | XLOC_025691 |
| TCONS_00052775 | lncRNA | upstream | 812014 | 47395882 ~ 47409399 (+) | False | XLOC_025689 |
| TCONS_00052372 | lncRNA | downstream | 67534 | 48297506 ~ 48315584 (+) | True | XLOC_025696 |
| TCONS_00052780 | lncRNA | downstream | 209094 | 48439066 ~ 48442896 (+) | True | XLOC_025697 |
| TCONS_00052781 | lncRNA | downstream | 234867 | 48464839 ~ 48467557 (+) | True | XLOC_025698 |
| TCONS_00052782 | lncRNA | downstream | 388189 | 48618161 ~ 48629771 (+) | False | XLOC_025701 |
| TCONS_00052783 | lncRNA | downstream | 391148 | 48621120 ~ 48629771 (+) | True | XLOC_025701 |
| TCONS_00050563 | mRNA | upstream | 6226 | 48206469 ~ 48215187 (+) | True | XLOC_025694 |
| TCONS_00050562 | mRNA | upstream | 666636 | 47552353 ~ 47554777 (+) | True | XLOC_025692 |
| TCONS_00050560 | mRNA | upstream | 834036 | 47322494 ~ 47387377 (+) | True | XLOC_025688 |
| TCONS_00050559 | mRNA | upstream | 962969 | 47245764 ~ 47258444 (+) | True | XLOC_025687 |
| TCONS_00050557 | mRNA | upstream | 1008298 | 47130912 ~ 47213115 (+) | False | XLOC_025686 |
| TCONS_00050565 | mRNA | downstream | 4473 | 48234445 ~ 48327160 (+) | False | XLOC_025696 |
| TCONS_00050566 | mRNA | downstream | 243374 | 48473346 ~ 48489887 (+) | True | XLOC_025699 |
| TCONS_00050567 | mRNA | downstream | 331140 | 48561112 ~ 48578458 (+) | True | XLOC_025700 |
| TCONS_00050568 | mRNA | downstream | 612946 | 48842918 ~ 48869632 (+) | True | XLOC_025702 |
| TCONS_00050569 | mRNA | downstream | 791107 | 49021079 ~ 49024570 (+) | True | XLOC_025705 |
| TCONS_00050561 | other | upstream | 760810 | 47460488 ~ 47460603 (+) | True | XLOC_025690 |
| TCONS_00050528 | other | upstream | 2586227 | 45635077 ~ 45635186 (+) | True | XLOC_025668 |
| TCONS_00050515 | other | upstream | 3333260 | 44888037 ~ 44888153 (+) | True | XLOC_025662 |
| TCONS_00050507 | other | upstream | 4504498 | 43716827 ~ 43716915 (+) | True | XLOC_025656 |
| TCONS_00050506 | other | upstream | 4506630 | 43714699 ~ 43714783 (+) | True | XLOC_025655 |
| TCONS_00050573 | other | downstream | 902369 | 49132341 ~ 49132477 (+) | True | XLOC_025709 |
| TCONS_00050578 | other | downstream | 1839623 | 50069595 ~ 50075190 (+) | False | XLOC_025717 |
| TCONS_00050613 | other | downstream | 4390086 | 52620058 ~ 52620175 (+) | True | XLOC_025746 |
| TCONS_00050620 | other | downstream | 4598940 | 52828912 ~ 52829006 (+) | True | XLOC_025751 |
| TCONS_00050635 | other | downstream | 5837551 | 54067523 ~ 54067639 (+) | True | XLOC_025764 |
