RNA id: XM_036957459.1


Basic Information

Item Value
RNA id XM_036957459.1
length 3103
RNA type mRNA
GC content 0.55
exon number 18
gene id mcm10
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 26238009 ~ 26247743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGTTTGCTAGCTTGCTGTACGCGTTGTTGCTAGTTTAAGCGTTGTGAAAAATCGGATAACTTACTTATTTCGATATCTGCTTTTTAATCGGGAAAGGCTTGATCTTAAAATTCCAGGAAATGGATGgtgacgATGACCTGGACCTTCTAACAGAGCTGCTGGCTGAGAACGAGGCTGGAGAGGAGCAGCAGGCTAGCCAGGAAGCAGAGGATAACCTAGATGACCTGTTTGacaacgatgatgatgatgaagagtacagggagggactggagagggaggaagaggatggagcCGTTGCTCTCTTTGGAGATGTGGATGGCattgaagaggaggaagaagtcGAAACACAGCCATCTGGAGGGAAAGCTCCTGATAACCTCAATAAATCCCAAGAAGATTTACATGAGGAGCTGAGGCGTATGCAGGAGCAGATGCAGAGGCTGCAGCAGCAGCTAGAGGCCTCCCAGAAGAGCTCTACAGCCACCTCTACCCCAAACAGCATCCCAGGAACAAAGGCACCTTCCAAAGCTAACACTCCCTCACAGGGTCCCCCCAAACAGAGCTCCTCCAAGCCAGTTCGTCCCACACAGAAGACCAAGCCCCAAGCAGAGGGGAAGCCCTCGTCTGCCCCAGACCGAGGAGACAGCACCAAGCTACAGGAGTCCTCCGACTTCACCGCTCAGCTCAACAACGCTGACCTGTTCAAACGCAAAGGTCAAAGGACAGCTCACCAGGTCCAGCCCAGCACTACAGCAGCCGCTACAGACACCAGAGGTCCACTGGTGGAGATTAAGACTCACAGCTCCTTCCAGCCAATAGCAAGCAGTAGTAGGACCAACAGTACGGTACGTTCATCGCTACCTTCCCAGTCCAATGCGGCTGCAGCCCTGTCCGCCGTACGACAGGCCAatccccttccatctctccctaaaGACGTCGCCATCGAGAAGTACTCTGGACTGCGGCTGAgGCGACCACGCGTGTCCTCCACAGAGATGGATCGTAAGATGGCCGACCGCAAGCTGATTCGGCTCTCCCAATTGCCTGGGCGCCTGGCCCGGGAGAAACTGGATGAGTGCGACTGGGTCACCTTCGCTGTGCTGGTCAACAAAGCTACACCACAGAGCAACAGCAGTGGTAAGACGTTCAGCATCTGGAAGCTGTCTGACCTCCATGACCTGGAAGTGTAcgtgtctctcttcctgtttggGGAGGTGCATAAGGAACACTGGAAGACTGAGCCAGGCACCGTCATGGGCATCCTCAACCCCAACCCCATGAAGGCCAAAGACGGATATGacgggGTGTCTCTGTCAGTGGACCACCATCAGAAGGTGTTGTTGATGGGGGAGGCTCAGGACTATGGCACCTGTAAGGCAGCCAAGAAGAACGGAGACCCCTGCTCTCAGATTGTCAACCTGtatgAGTGCCAGTACTGCCAGTACCACGTCAAGGCCCAGTATAAGAAGATGAGTGCCCAGCGGGCCGAGCTGCAGTCGTCTTTCTCAGGGAAGGCCACAGGGAAGGCCAAGGGGAAGGGCAACAGCCTGAAGGAACGACTGTGTCAGACTGGCTTCCACTACGGAGGCATGTCCTCACCAGCCTGCGCTGCcgcactGTCTGCGTCTGGCCCTAAGAAGCCCACCCAGACCACTCTAGGGAACCTGTTTGTGAAGGGATCAGACCAGCTGGCCAGCCAGGCCAAGAGACTGGCCATGAAGTCTAACGAGGTGTCTGGCTGCTCAGACGACTTCAAGGACCTGTTATCCATGCCTACCCCGGGAGCCCTTCAACTGAAGAGACACCTCACCAAACCCCCAGgTTCCAAGGGCTCAGCTGGTGCAGGGGTCCAGTCCATCTCTGCCTCTGACCTCCTGAAGCAGCAGaaacagcagcagaagcagcTCTTAGAGAACCGTAGACGCCGGGCAGAGGAGATCCAGCAGAGGGTCCTCCAGAACACAGGCAGGGCGGGGGTCCCCGGGGCCTCTCCCCCATCTAGAGGTGCCCTCCTTTCCCCTAAGTCTGCCTCAGAGGTCCCCAAAGTCACCCAGAGCCCCACCGCCCCCCACACCCCAACACTGGGCAGGGGTTTTAACGAGGGAGATGATATCTTGTTTTTTGACCACACCCCTCCTCCGCCCCCGACGCCACACAGCCTATCAGCAGCCAAGttGGCTGCTCTGAAGAAGCTGAGAGTGAAGGGGGCTGGGCTGGCCAAAGAAGACCCCAACGCTGTGAAAAGGAAGAGGAGCAACAGCACTGACATCACCACCAGGGTGCAGAAGAACCTGTCCTCGCCCGATGGTGAACAGCCTGGGGCCAAGGAGGAGGAGCCAGCCCAGAAGAAGAGGCGGGAAAAAATGGACTACGTCCAATCAGAGGAGTTCAAGAAGATCCTCAACGCCAAGTCCCGGCACGGGGCCGAGCTACAGGCGgCAGAGTACCAGCAGCAGGAGAGCTACTTTGACCCCCTGGTGAAGAAGGAGGCGATGGAGGACAAGATGAGGAACATCAGAGAGCAGAAGTGTCGAGCCGTCAGCTGTAAAAAGTGTAAGTACACGTACTTCAAGCCTGCTGAtcgctgtgtggaggagaagcaTGAGCTGCAGTGGCACGACGCCACCAAACGCTTCTTCAAGTGCCCCTGTGGACAGAGAGCCATCGCACTGGACCGCCTGCCACACAAACACTGCAGTAACTGTGGCCTGTTCAAATGGGAAAGGGACGGCATGTTGAAGGAGAAGTCAGGCCCTAAGATCGCTGGGGAGCTCCTGCAGCCTCGAGGTGACGAGCAGCCCAAGTTCCTCAACAGCATGCAGTAGCCCTGGGTCACTGACCGTCACCTTCATCATTGTCTTCATCATATGAAGCTGCTGGTGCTGTTGGAGTTTCTTGTGTGTATATTTATTTGCATGTCGCTTTTTAAATTtcctttttaatgttttttttagtGTCAATGTCATTTTAAGTTGATTATGGATTTTAAATTGCTGTGTTTTGAATGGATTCGATTGAATTTCCCGAATGAGCTGTTTGTCGTTCCCTGCTGCTGGGTTTGATGTGAATGTGCTGATTAAATCGTGCTGAGTGATTTACCAA

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K10736 MCM10; minichromosome maintenance protein 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1971831 lncRNA upstream 106167 26130779 ~ 26132124 (+) True G1721131
TU1971827 lncRNA upstream 111301 26107859 ~ 26126990 (+) True G1721128
TU1971825 lncRNA upstream 131254 26106779 ~ 26107037 (+) True G1721126
TU1971824 lncRNA upstream 132121 26105941 ~ 26106170 (+) True G1721125
TU1971764 lncRNA upstream 149352 26088632 ~ 26088939 (+) True il15ra
TU1971898 lncRNA downstream 473 26248216 ~ 26248462 (+) True G1721188
TU1971899 lncRNA downstream 761 26248504 ~ 26249045 (+) True G1721189
TU1971901 lncRNA downstream 3444 26251187 ~ 26251509 (+) True G1721191
TU1971902 lncRNA downstream 6331 26254074 ~ 26254706 (+) True G1721192
TU1971903 lncRNA downstream 7925 26255668 ~ 26256496 (+) True G1721193
XM_036957462.1 mRNA upstream 1078 26230069 ~ 26237213 (+) False LOC110500144
XM_021577334.2 mRNA downstream 18399 26266142 ~ 26301475 (+) False LOC110500147
XM_036957469.1 mRNA downstream 18399 26266142 ~ 26301475 (+) False LOC110500147
XM_036957468.1 mRNA downstream 22280 26270023 ~ 26301475 (+) True LOC110500147
XM_021577337.2 mRNA downstream 68791 26316534 ~ 26324591 (+) False LOC110500149
XM_036957472.1 mRNA downstream 68791 26316534 ~ 26324591 (+) False LOC110500149
TU1971779 other upstream 196448 26038302 ~ 26041843 (+) True G1721084
TU1971515 other upstream 601702 25636335 ~ 25636589 (+) True G1720853
TU1971493 other upstream 626023 25611816 ~ 25612268 (+) True G1720836
TU1969980 other upstream 1920753 24316638 ~ 24317538 (+) True LOC110500097
TU1969963 other upstream 1943494 24277831 ~ 24294797 (+) True adm2a
TU1971907 other downstream 82031 26329774 ~ 26331093 (+) True cep83
TU1972909 other downstream 573904 26821647 ~ 26821935 (+) True G1722079
TU1974515 other downstream 2074777 28322520 ~ 28324617 (+) True LOC110501048
TU1974550 other downstream 2093758 28341501 ~ 28343734 (+) False LOC110500183
TU1974551 other downstream 2093758 28341501 ~ 28342796 (+) False LOC110500183

Expression Profile