Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1982279 |
| length | 377 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | LOC110500288 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34309099 ~ 34317797 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1982290 | lncRNA | upstream | 3376 | 34305368 ~ 34306209 (+) | True | G1730741 |
| TU1982291 | lncRNA | upstream | 7072 | 34301668 ~ 34302513 (+) | True | G1730742 |
| TU1982293 | lncRNA | upstream | 11883 | 34297169 ~ 34297702 (+) | True | G1730744 |
| TU1982196 | lncRNA | upstream | 90861 | 34169294 ~ 34218724 (+) | True | G1730651 |
| TU1982125 | lncRNA | upstream | 190209 | 34118996 ~ 34119376 (+) | True | G1730581 |
| TU1982295 | lncRNA | downstream | 178 | 34310139 ~ 34310515 (+) | True | G1730746 |
| TU1982424 | lncRNA | downstream | 69627 | 34379588 ~ 34379848 (+) | True | G1730861 |
| TU1982429 | lncRNA | downstream | 72232 | 34382193 ~ 34382447 (+) | True | G1730866 |
| TU1982520 | lncRNA | downstream | 195281 | 34505242 ~ 34558860 (+) | True | G1730956 |
| TU1982558 | lncRNA | downstream | 265287 | 34575248 ~ 34580030 (+) | True | G1730994 |
| XM_021577581.2 | mRNA | upstream | 440569 | 33709496 ~ 33869016 (+) | False | LOC110500285 |
| XM_036957698.1 | mRNA | upstream | 440569 | 33749559 ~ 33869016 (+) | False | LOC110500285 |
| XM_036957699.1 | mRNA | upstream | 499868 | 33709461 ~ 33809717 (+) | False | LOC110500285 |
| XM_021577578.2 | mRNA | upstream | 793597 | 33329927 ~ 33515988 (+) | True | LOC110500284 |
| XM_021577577.2 | mRNA | upstream | 1056062 | 33199554 ~ 33253523 (+) | False | LOC110500282 |
| XM_021577584.2 | mRNA | downstream | 1034 | 34310995 ~ 34317797 (+) | False | LOC110500288 |
| XM_021577588.2 | mRNA | downstream | 15249 | 34325210 ~ 34329578 (+) | False | LOC100135927 |
| XM_036957701.1 | mRNA | downstream | 15249 | 34325210 ~ 34329578 (+) | False | LOC100135927 |
| XM_036957702.1 | mRNA | downstream | 15249 | 34325210 ~ 34329578 (+) | False | LOC100135927 |
| XR_005038582.1 | mRNA | downstream | 15249 | 34325210 ~ 34329578 (+) | False | LOC100135927 |
| TU1981477 | other | upstream | 440608 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
| TU1980944 | other | upstream | 987824 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1979380 | other | upstream | 2147193 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1979348 | other | upstream | 2172889 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979347 | other | upstream | 2174586 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1983724 | other | downstream | 1129328 | 35439289 ~ 35484354 (+) | True | G1732028 |
| TU1984485 | other | downstream | 1731370 | 36041331 ~ 36042488 (+) | True | G1732735 |
| TU1984576 | other | downstream | 1923161 | 36233122 ~ 36236265 (+) | True | LOC110500325 |
| TU1984969 | other | downstream | 2447028 | 36756989 ~ 36758883 (+) | False | G1733187 |
| TU1986149 | other | downstream | 2938666 | 37248627 ~ 37252175 (+) | False | zgc:109889 |
