Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036956493.1 |
| length | 1151 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 4 |
| gene id | LOC110501070 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 34917692 ~ 34931171 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007275 | multicellular organism development | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0005102 | signaling receptor binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1982999 | lncRNA | upstream | 97433 | 34819994 ~ 34820259 (+) | True | G1731373 |
| TU1982979 | lncRNA | upstream | 117746 | 34799576 ~ 34799946 (+) | True | G1731353 |
| TU1982875 | lncRNA | upstream | 143075 | 34774292 ~ 34774617 (+) | True | G1731259 |
| TU1982866 | lncRNA | upstream | 155293 | 34762136 ~ 34762399 (+) | True | G1731250 |
| TU1982861 | lncRNA | upstream | 161126 | 34756304 ~ 34756566 (+) | True | G1731245 |
| TU1983185 | lncRNA | downstream | 35321 | 34966492 ~ 34966722 (+) | True | G1731545 |
| TU1983243 | lncRNA | downstream | 52678 | 34983849 ~ 34984050 (+) | True | G1731601 |
| TU1983247 | lncRNA | downstream | 57580 | 34988751 ~ 34989001 (+) | True | G1731605 |
| TU1983241 | lncRNA | downstream | 339886 | 35271057 ~ 35271595 (+) | True | G1731599 |
| TU1983402 | lncRNA | downstream | 342037 | 35273208 ~ 35273445 (+) | True | G1731754 |
| XR_005038436.1 | mRNA | upstream | 125128 | 34784413 ~ 34792564 (+) | True | LOC118942784 |
| XM_021577597.2 | mRNA | upstream | 135109 | 34766720 ~ 34782583 (+) | True | LOC110500293 |
| XM_036957702.1 | mRNA | upstream | 588114 | 34325210 ~ 34329578 (+) | False | LOC100135927 |
| XM_021577598.2 | mRNA | downstream | 98088 | 35029259 ~ 35033416 (+) | True | LOC110500295 |
| XM_021577600.2 | mRNA | downstream | 140199 | 35071370 ~ 35267800 (+) | True | LOC110500296 |
| NM_001165066.2 | mRNA | downstream | 572520 | 35503691 ~ 35510121 (+) | False | sh2d1ab |
| XR_005038438.1 | mRNA | downstream | 705416 | 35636587 ~ 35637138 (+) | True | LOC118942786 |
| XM_021577628.2 | mRNA | downstream | 857320 | 35788491 ~ 35982905 (+) | False | LOC110500322 |
| TU1981477 | other | upstream | 1048715 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
| TU1980944 | other | upstream | 1595931 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1979380 | other | upstream | 2755300 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1979348 | other | upstream | 2780996 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979347 | other | upstream | 2782693 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1983724 | other | downstream | 508118 | 35439289 ~ 35484354 (+) | True | G1732028 |
| TU1984485 | other | downstream | 1110160 | 36041331 ~ 36042488 (+) | True | G1732735 |
| TU1984576 | other | downstream | 1301951 | 36233122 ~ 36236265 (+) | True | LOC110500325 |
| TU1984969 | other | downstream | 1825818 | 36756989 ~ 36758883 (+) | False | G1733187 |
| TU1986149 | other | downstream | 2317456 | 37248627 ~ 37252175 (+) | False | zgc:109889 |
