Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1983752 |
| length | 772 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | sh2d1ab |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 35503671 ~ 35510121 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1983719 | lncRNA | upstream | 61198 | 35440724 ~ 35442473 (+) | False | G1732024 |
| TU1983720 | lncRNA | upstream | 61198 | 35440724 ~ 35442473 (+) | True | G1732024 |
| TU1983734 | lncRNA | upstream | 77672 | 35425211 ~ 35425999 (+) | True | G1732038 |
| TU1983730 | lncRNA | upstream | 99957 | 35402946 ~ 35403714 (+) | True | G1732034 |
| TU1983726 | lncRNA | upstream | 109461 | 35393921 ~ 35394210 (+) | True | G1732030 |
| TU1983767 | lncRNA | downstream | 14440 | 35524466 ~ 35524815 (+) | True | G1732071 |
| TU1983828 | lncRNA | downstream | 25834 | 35535860 ~ 35536095 (+) | True | G1732129 |
| TU1983837 | lncRNA | downstream | 30900 | 35540926 ~ 35541184 (+) | True | G1732137 |
| TU1983841 | lncRNA | downstream | 32972 | 35542998 ~ 35543217 (+) | True | G1732141 |
| TU1983843 | lncRNA | downstream | 33987 | 35544013 ~ 35544259 (+) | True | G1732143 |
| XM_021577600.2 | mRNA | upstream | 235871 | 35071370 ~ 35267800 (+) | True | LOC110500296 |
| XM_021577598.2 | mRNA | upstream | 470255 | 35029259 ~ 35033416 (+) | True | LOC110500295 |
| XM_036956493.1 | mRNA | upstream | 572500 | 34917692 ~ 34931171 (+) | True | LOC110501070 |
| XR_005038436.1 | mRNA | upstream | 711107 | 34784413 ~ 34792564 (+) | True | LOC118942784 |
| XM_021577597.2 | mRNA | upstream | 721088 | 34766720 ~ 34782583 (+) | True | LOC110500293 |
| XR_005038438.1 | mRNA | downstream | 126561 | 35636587 ~ 35637138 (+) | True | LOC118942786 |
| XM_021577628.2 | mRNA | downstream | 278465 | 35788491 ~ 35982905 (+) | False | LOC110500322 |
| XM_021577626.2 | mRNA | downstream | 278466 | 35788492 ~ 35982905 (+) | False | LOC110500322 |
| XM_021577627.2 | mRNA | downstream | 278466 | 35788492 ~ 35982905 (+) | True | LOC110500322 |
| XM_021577629.2 | mRNA | downstream | 489795 | 35999821 ~ 36039069 (+) | True | sepsecs |
| TU1983724 | other | upstream | 19317 | 35439289 ~ 35484354 (+) | True | G1732028 |
| TU1981477 | other | upstream | 1634694 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
| TU1980944 | other | upstream | 2181910 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1979380 | other | upstream | 3341279 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1979348 | other | upstream | 3366975 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1984485 | other | downstream | 531305 | 36041331 ~ 36042488 (+) | True | G1732735 |
| TU1984576 | other | downstream | 723096 | 36233122 ~ 36236265 (+) | True | LOC110500325 |
| TU1984969 | other | downstream | 1246963 | 36756989 ~ 36758883 (+) | False | G1733187 |
| TU1986149 | other | downstream | 1738601 | 37248627 ~ 37252175 (+) | False | zgc:109889 |
| TU1986313 | other | downstream | 1860931 | 37370957 ~ 37371667 (+) | True | G1734420 |
