Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001165051.1 |
| length | 892 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | rs4x |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 37766654 ~ 37772954 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02987 | RP-S4e, RPS4; small subunit ribosomal protein S4e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1986706 | lncRNA | upstream | 1119 | 37763412 ~ 37765535 (+) | True | cited1 |
| TU1986719 | lncRNA | upstream | 49441 | 37716897 ~ 37717213 (+) | True | G1734762 |
| TU1986699 | lncRNA | upstream | 66717 | 37699418 ~ 37699937 (+) | True | G1734745 |
| TU1986697 | lncRNA | upstream | 69663 | 37696759 ~ 37696991 (+) | True | G1734743 |
| TU1986499 | lncRNA | upstream | 75523 | 37690913 ~ 37691131 (+) | True | G1734588 |
| TU1986764 | lncRNA | downstream | 16451 | 37789405 ~ 37789781 (+) | True | G1734802 |
| TU1986830 | lncRNA | downstream | 115570 | 37888524 ~ 37888725 (+) | True | G1734864 |
| TU1986844 | lncRNA | downstream | 131668 | 37904622 ~ 37905024 (+) | True | G1734877 |
| TU1986845 | lncRNA | downstream | 133623 | 37906577 ~ 37906780 (+) | True | G1734878 |
| TU1986891 | lncRNA | downstream | 204146 | 37977100 ~ 37977958 (+) | True | G1734921 |
| XM_021577611.2 | mRNA | upstream | 1092 | 37758759 ~ 37765562 (+) | False | cited1 |
| XM_036957748.1 | mRNA | upstream | 9064 | 37721118 ~ 37757590 (+) | True | hdac8 |
| XR_002470081.2 | mRNA | upstream | 63307 | 37701441 ~ 37703347 (+) | True | LOC110500309 |
| XM_021577614.2 | mRNA | upstream | 110502 | 37649502 ~ 37656152 (+) | False | LOC110500311 |
| XM_036957731.1 | mRNA | upstream | 228830 | 37431184 ~ 37537824 (+) | False | si:dkey-172j4.3 |
| XM_036957749.1 | mRNA | downstream | 28104 | 37801058 ~ 37953220 (+) | False | nhsl2 |
| XM_036957750.1 | mRNA | downstream | 39706 | 37812660 ~ 37953220 (+) | False | nhsl2 |
| XM_036957751.1 | mRNA | downstream | 121029 | 37893983 ~ 37953220 (+) | False | nhsl2 |
| XM_036957752.1 | mRNA | downstream | 147337 | 37920291 ~ 37953220 (+) | True | nhsl2 |
| XM_036957753.1 | mRNA | downstream | 185063 | 37958017 ~ 38050782 (+) | False | arhgap36 |
| TU1986710 | other | upstream | 3396 | 37760335 ~ 37763258 (+) | False | cited1 |
| TU1986376 | other | upstream | 197701 | 37565428 ~ 37568953 (+) | True | G1734479 |
| TU1986313 | other | upstream | 394987 | 37370957 ~ 37371667 (+) | True | G1734420 |
| TU1986149 | other | upstream | 514479 | 37248627 ~ 37252175 (+) | False | zgc:109889 |
| TU1984969 | other | upstream | 1007771 | 36756989 ~ 36758883 (+) | False | G1733187 |
| TU1986951 | other | downstream | 270137 | 38043091 ~ 38045066 (+) | False | G1734960 |
| TU1986954 | other | downstream | 272154 | 38045108 ~ 38046506 (+) | True | G1734961 |
| TU1986976 | other | downstream | 304597 | 38077551 ~ 38082274 (+) | True | LOC110500301 |
| TU1987950 | other | downstream | 1095013 | 38867967 ~ 38924928 (+) | True | arrb2b |
| TU1988123 | other | downstream | 1406333 | 39179287 ~ 39209485 (+) | True | nat16 |
