Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1990607 |
| length | 404 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 2 |
| gene id | prkd4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 41203290 ~ 41215989 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1990596 | lncRNA | upstream | 39075 | 41173034 ~ 41173319 (+) | True | G1738185 |
| TU1990593 | lncRNA | upstream | 44439 | 41167676 ~ 41167955 (+) | True | G1738182 |
| TU1990585 | lncRNA | upstream | 60696 | 41151458 ~ 41151698 (+) | True | G1738174 |
| TU1990584 | lncRNA | upstream | 61530 | 41150645 ~ 41150864 (+) | True | G1738173 |
| TU1990583 | lncRNA | upstream | 63863 | 41148322 ~ 41148531 (+) | True | G1738172 |
| TU1990697 | lncRNA | downstream | 134738 | 41350490 ~ 41351424 (+) | True | G1738265 |
| TU1990724 | lncRNA | downstream | 174595 | 41390347 ~ 41392653 (+) | False | G1738291 |
| TU1990727 | lncRNA | downstream | 239804 | 41455556 ~ 41525819 (+) | True | G1738291 |
| TU1990740 | lncRNA | downstream | 257511 | 41473263 ~ 41480556 (+) | True | G1738303 |
| TU1991325 | lncRNA | downstream | 311917 | 41527669 ~ 41535345 (+) | True | G1738824 |
| XM_036957840.1 | mRNA | upstream | 11273 | 41184269 ~ 41201121 (+) | False | LOC110500431 |
| XM_036957841.1 | mRNA | upstream | 11273 | 41184861 ~ 41201121 (+) | False | LOC110500431 |
| XM_036957842.1 | mRNA | upstream | 11273 | 41185153 ~ 41201121 (+) | True | LOC110500431 |
| XM_036957838.1 | mRNA | upstream | 28396 | 41130826 ~ 41183998 (+) | False | LOC110500427 |
| XM_036957839.1 | mRNA | upstream | 28396 | 41130826 ~ 41183998 (+) | True | LOC110500427 |
| XM_036957843.1 | mRNA | downstream | 9020 | 41224772 ~ 41247133 (+) | True | LOC110500837 |
| XM_021577811.2 | mRNA | downstream | 41571 | 41257323 ~ 41266367 (+) | True | LOC110500434 |
| LOC110500843 | mRNA | downstream | 369056 | 41584808 ~ 41601466 (+) | True | LOC110500843 |
| XM_036956508.1 | mRNA | downstream | 393498 | 41609250 ~ 41615747 (+) | True | LOC110500443 |
| XM_036957845.1 | mRNA | downstream | 427255 | 41643007 ~ 41672302 (+) | False | LOC110500439 |
| TU1990529 | other | upstream | 183258 | 41024710 ~ 41029136 (+) | True | G1738119 |
| TU1990461 | other | upstream | 215074 | 40993155 ~ 40997320 (+) | True | G1738057 |
| TU1990244 | other | upstream | 658541 | 40552011 ~ 40553853 (+) | True | G1737866 |
| TU1989857 | other | upstream | 808709 | 40401504 ~ 40403685 (+) | True | LOC110500409 |
| TU1989649 | other | upstream | 1149069 | 40062706 ~ 40063325 (+) | True | G1737353 |
| TU1991654 | other | downstream | 673059 | 41888811 ~ 41891367 (+) | False | G1739103 |
| TU1991652 | other | downstream | 679577 | 41895329 ~ 41897856 (+) | True | G1739103 |
| TU1991899 | other | downstream | 1069304 | 42285056 ~ 42288500 (+) | True | cxcl8c |
| TU1991912 | other | downstream | 1138825 | 42354577 ~ 42355327 (+) | True | si:dkey-185m8.2 |
| TU1992021 | other | downstream | 1285597 | 42501349 ~ 42502357 (+) | True | G1739440 |
