RNA id: trnan-guu-133


Basic Information

Item Value
RNA id trnan-guu-133
length 74
RNA type mRNA
GC content 0.50
exon number 1
gene id trnan-guu-133
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41788242 ~ 41788315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtctctgtggcgcaattggttagcgcgttagactgttaatctaaaggttggttgTTCAaacccacccagggacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1991612 lncRNA upstream 694 41778827 ~ 41787548 (+) False G1739070
TU1991611 lncRNA upstream 694 41780975 ~ 41787548 (+) True G1739070
TU1991454 lncRNA upstream 18395 41769501 ~ 41769847 (+) True G1738925
TU1991453 lncRNA upstream 19171 41768783 ~ 41769071 (+) True G1738924
TU1991417 lncRNA upstream 66234 41721680 ~ 41722008 (+) True G1738893
TU1991622 lncRNA downstream 10608 41798923 ~ 41799152 (+) True G1739078
TU1991673 lncRNA downstream 132284 41920599 ~ 41923340 (+) False G1739115
TU1991675 lncRNA downstream 132284 41920599 ~ 41926648 (+) True G1739115
TU1991694 lncRNA downstream 147118 41935433 ~ 41937376 (+) True G1739131
TU1991640 lncRNA downstream 325001 42113316 ~ 42120480 (+) True G1739093
trnan-guu-132 mRNA upstream 3442 41784727 ~ 41784800 (+) True trnan-guu-132
trnan-guu-131 mRNA upstream 4616 41783553 ~ 41783626 (+) True trnan-guu-131
trnan-guu-130 mRNA upstream 5788 41782381 ~ 41782454 (+) True trnan-guu-130
trnan-guu-129 mRNA upstream 6961 41781208 ~ 41781281 (+) True trnan-guu-129
trnan-guu-128 mRNA upstream 9302 41778867 ~ 41778940 (+) True trnan-guu-128
trnan-guu-134 mRNA downstream 1100 41789415 ~ 41789488 (+) True trnan-guu-134
trnan-guu-135 mRNA downstream 2272 41790587 ~ 41790660 (+) True trnan-guu-135
trnan-guu-136 mRNA downstream 3447 41791762 ~ 41791835 (+) True trnan-guu-136
trnan-guu-137 mRNA downstream 4622 41792937 ~ 41793010 (+) True trnan-guu-137
trnan-guu-138 mRNA downstream 5797 41794112 ~ 41794185 (+) True trnan-guu-138
TU1990529 other upstream 759106 41024710 ~ 41029136 (+) True G1738119
TU1990461 other upstream 790922 40993155 ~ 40997320 (+) True G1738057
TU1990244 other upstream 1234389 40552011 ~ 40553853 (+) True G1737866
TU1989857 other upstream 1384557 40401504 ~ 40403685 (+) True LOC110500409
TU1989649 other upstream 1724917 40062706 ~ 40063325 (+) True G1737353
TU1991654 other downstream 100496 41888811 ~ 41891367 (+) False G1739103
TU1991652 other downstream 107014 41895329 ~ 41897856 (+) True G1739103
TU1991899 other downstream 496741 42285056 ~ 42288500 (+) True cxcl8c
TU1991912 other downstream 566262 42354577 ~ 42355327 (+) True si:dkey-185m8.2
TU1992021 other downstream 713034 42501349 ~ 42502357 (+) True G1739440