RNA id: trnan-guu-147


Basic Information

Item Value
RNA id trnan-guu-147
length 74
RNA type mRNA
GC content 0.53
exon number 1
gene id trnan-guu-147
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41808171 ~ 41808244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctctctgtggcgcaattggttagcgcgttagactgttaatctaaaggttggtggttcaagcccacccagggacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1991622 lncRNA upstream 9019 41798923 ~ 41799152 (+) True G1739078
TU1991612 lncRNA upstream 20623 41778827 ~ 41787548 (+) False G1739070
TU1991611 lncRNA upstream 20623 41780975 ~ 41787548 (+) True G1739070
TU1991454 lncRNA upstream 38324 41769501 ~ 41769847 (+) True G1738925
TU1991453 lncRNA upstream 39100 41768783 ~ 41769071 (+) True G1738924
TU1991673 lncRNA downstream 112355 41920599 ~ 41923340 (+) False G1739115
TU1991675 lncRNA downstream 112355 41920599 ~ 41926648 (+) True G1739115
TU1991694 lncRNA downstream 127189 41935433 ~ 41937376 (+) True G1739131
TU1991640 lncRNA downstream 305072 42113316 ~ 42120480 (+) True G1739093
TU1991816 lncRNA downstream 314146 42122390 ~ 42123986 (+) True G1739245
trnan-guu-146 mRNA upstream 4611 41803487 ~ 41803560 (+) True trnan-guu-146
trnan-guu-145 mRNA upstream 5779 41802319 ~ 41802392 (+) True trnan-guu-145
trnan-guu-144 mRNA upstream 6950 41801148 ~ 41801221 (+) True trnan-guu-144
trnan-guu-143 mRNA upstream 8118 41799980 ~ 41800053 (+) True trnan-guu-143
trnan-guu-142 mRNA upstream 9289 41798809 ~ 41798882 (+) True trnan-guu-142
trnan-guu-148 mRNA downstream 1099 41809343 ~ 41809416 (+) True trnan-guu-148
trnan-guu-149 mRNA downstream 2271 41810515 ~ 41810588 (+) True trnan-guu-149
trnan-guu-150 mRNA downstream 3446 41811690 ~ 41811763 (+) True trnan-guu-150
trnan-guu-151 mRNA downstream 4618 41812862 ~ 41812935 (+) True trnan-guu-151
trnan-guu-152 mRNA downstream 5793 41814037 ~ 41814110 (+) True trnan-guu-152
TU1990529 other upstream 779035 41024710 ~ 41029136 (+) True G1738119
TU1990461 other upstream 810851 40993155 ~ 40997320 (+) True G1738057
TU1990244 other upstream 1254318 40552011 ~ 40553853 (+) True G1737866
TU1989857 other upstream 1404486 40401504 ~ 40403685 (+) True LOC110500409
TU1989649 other upstream 1744846 40062706 ~ 40063325 (+) True G1737353
TU1991654 other downstream 80567 41888811 ~ 41891367 (+) False G1739103
TU1991652 other downstream 87085 41895329 ~ 41897856 (+) True G1739103
TU1991899 other downstream 476812 42285056 ~ 42288500 (+) True cxcl8c
TU1991912 other downstream 546333 42354577 ~ 42355327 (+) True si:dkey-185m8.2
TU1992021 other downstream 693105 42501349 ~ 42502357 (+) True G1739440