RNA id: trnan-guu-190


Basic Information

Item Value
RNA id trnan-guu-190
length 74
RNA type mRNA
GC content 0.54
exon number 1
gene id trnan-guu-190
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41867027 ~ 41867100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtctctgtggcgcaattggttagcgcgttagactgttaatctaaaggttggtggttcgagcccacccagggacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1991622 lncRNA upstream 67875 41798923 ~ 41799152 (+) True G1739078
TU1991612 lncRNA upstream 79479 41778827 ~ 41787548 (+) False G1739070
TU1991611 lncRNA upstream 79479 41780975 ~ 41787548 (+) True G1739070
TU1991454 lncRNA upstream 97180 41769501 ~ 41769847 (+) True G1738925
TU1991453 lncRNA upstream 97956 41768783 ~ 41769071 (+) True G1738924
TU1991673 lncRNA downstream 53499 41920599 ~ 41923340 (+) False G1739115
TU1991675 lncRNA downstream 53499 41920599 ~ 41926648 (+) True G1739115
TU1991694 lncRNA downstream 68333 41935433 ~ 41937376 (+) True G1739131
TU1991640 lncRNA downstream 246216 42113316 ~ 42120480 (+) True G1739093
TU1991816 lncRNA downstream 255290 42122390 ~ 42123986 (+) True G1739245
trnan-guu-189 mRNA upstream 1094 41865860 ~ 41865933 (+) True trnan-guu-189
trnan-guu-188 mRNA upstream 2262 41864692 ~ 41864765 (+) True trnan-guu-188
trnan-guu-187 mRNA upstream 3414 41863540 ~ 41863613 (+) True trnan-guu-187
trnan-guu-186 mRNA upstream 4582 41862372 ~ 41862445 (+) True trnan-guu-186
trnan-guu-185 mRNA upstream 5038 41861916 ~ 41861989 (+) True trnan-guu-185
trnan-guu-191 mRNA downstream 1094 41868194 ~ 41868267 (+) True trnan-guu-191
trnan-guu-192 mRNA downstream 2246 41869346 ~ 41869419 (+) True trnan-guu-192
trnan-guu-193 mRNA downstream 3414 41870514 ~ 41870587 (+) True trnan-guu-193
trnan-guu-194 mRNA downstream 4575 41871675 ~ 41871748 (+) True trnan-guu-194
trnan-guu-195 mRNA downstream 8804 41875904 ~ 41875977 (+) True trnan-guu-195
TU1990529 other upstream 837891 41024710 ~ 41029136 (+) True G1738119
TU1990461 other upstream 869707 40993155 ~ 40997320 (+) True G1738057
TU1990244 other upstream 1313174 40552011 ~ 40553853 (+) True G1737866
TU1989857 other upstream 1463342 40401504 ~ 40403685 (+) True LOC110500409
TU1989649 other upstream 1803702 40062706 ~ 40063325 (+) True G1737353
TU1991654 other downstream 21711 41888811 ~ 41891367 (+) False G1739103
TU1991652 other downstream 28229 41895329 ~ 41897856 (+) True G1739103
TU1991899 other downstream 417956 42285056 ~ 42288500 (+) True cxcl8c
TU1991912 other downstream 487477 42354577 ~ 42355327 (+) True si:dkey-185m8.2
TU1992021 other downstream 634249 42501349 ~ 42502357 (+) True G1739440