RNA id: trnan-guu-196


Basic Information

Item Value
RNA id trnan-guu-196
length 74
RNA type mRNA
GC content 0.53
exon number 1
gene id trnan-guu-196
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41877071 ~ 41877144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtctctgtggcgcaattggttagcgcgttagactgttaatctaaaggttggtggttcaagcccacccagggacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1991622 lncRNA upstream 77919 41798923 ~ 41799152 (+) True G1739078
TU1991612 lncRNA upstream 89523 41778827 ~ 41787548 (+) False G1739070
TU1991611 lncRNA upstream 89523 41780975 ~ 41787548 (+) True G1739070
TU1991454 lncRNA upstream 107224 41769501 ~ 41769847 (+) True G1738925
TU1991453 lncRNA upstream 108000 41768783 ~ 41769071 (+) True G1738924
TU1991673 lncRNA downstream 43455 41920599 ~ 41923340 (+) False G1739115
TU1991675 lncRNA downstream 43455 41920599 ~ 41926648 (+) True G1739115
TU1991694 lncRNA downstream 58289 41935433 ~ 41937376 (+) True G1739131
TU1991640 lncRNA downstream 236172 42113316 ~ 42120480 (+) True G1739093
TU1991816 lncRNA downstream 245246 42122390 ~ 42123986 (+) True G1739245
trnan-guu-195 mRNA upstream 1094 41875904 ~ 41875977 (+) True trnan-guu-195
trnan-guu-194 mRNA upstream 5323 41871675 ~ 41871748 (+) True trnan-guu-194
trnan-guu-193 mRNA upstream 6484 41870514 ~ 41870587 (+) True trnan-guu-193
trnan-guu-192 mRNA upstream 7652 41869346 ~ 41869419 (+) True trnan-guu-192
trnan-guu-191 mRNA upstream 8804 41868194 ~ 41868267 (+) True trnan-guu-191
trnan-guu-197 mRNA downstream 2617 41879761 ~ 41879834 (+) True trnan-guu-197
XM_021578376.2 mRNA downstream 65477 41942621 ~ 41975186 (+) True LOC110500845
XM_036957880.1 mRNA downstream 129171 42006315 ~ 42052638 (+) False LOC110500448
XM_036957881.1 mRNA downstream 129171 42006315 ~ 42052638 (+) True LOC110500448
trnas-gcu-263 mRNA downstream 211525 42088669 ~ 42088750 (+) True trnas-gcu-263
TU1990529 other upstream 847935 41024710 ~ 41029136 (+) True G1738119
TU1990461 other upstream 879751 40993155 ~ 40997320 (+) True G1738057
TU1990244 other upstream 1323218 40552011 ~ 40553853 (+) True G1737866
TU1989857 other upstream 1473386 40401504 ~ 40403685 (+) True LOC110500409
TU1989649 other upstream 1813746 40062706 ~ 40063325 (+) True G1737353
TU1991654 other downstream 11667 41888811 ~ 41891367 (+) False G1739103
TU1991652 other downstream 18185 41895329 ~ 41897856 (+) True G1739103
TU1991899 other downstream 407912 42285056 ~ 42288500 (+) True cxcl8c
TU1991912 other downstream 477433 42354577 ~ 42355327 (+) True si:dkey-185m8.2
TU1992021 other downstream 624205 42501349 ~ 42502357 (+) True G1739440