RNA id: TCONS_00004810


Basic Information

Item Value
RNA id TCONS_00004810
length 1198
RNA type mRNA
GC content 0.48
exon number 11
gene id XLOC_002584
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 7831439 ~ 7858553 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTGTCACATGGAATGTAGGCTCTGGTATGCCACCTGATGACATCACGTCCTTGTTTGGTCCTGGCATTGAAAATGGAAGCACTGACATGTTTGTCGTGGGACTGCAGGAAGTGAACTCCATGATAAACAAGAGGCTCAAAGATGCTCTCTTCACAGACCAGTGGAGTGAGCTCTGCATGGACACACTCAGTCGATTTGGATATGTGTTGGTGGCTTCTCAAAGGATGCAGGGGGTGTTTTTGCTGGTGTTTTCCAAATTCTGCCACCTTCCCTTTCTCAGAGGAGTACAAACCCAAAGCACACGCACCGGCCTGGGAGGATACTGGGGGAATAAAGGAGGTGTAAGTGCACGCATGATGGTTTTCGGACACCCCGTGTGTTTCCTAAACTGCCACCTGCCGGCTCACATGAGAAACCTGGAGCAGCGCATGGAGGATTTTGAGAGCATCCTTCAGCAGCAGCAGTTTGAAGGCAGCAATGCTGTTGGCGTCCTGGACCATGATGTGGTGTTCTGGTTTGGAGATCTGAACTTCCGGATTGAAGGTTATGATATTCATGTGGTGAAAAGTGCTATTGAGAATGACAAACTGCCTCTATTGTGGGAGAAAGATCAGCTCAACATGGCCAAAAAGAGTGAATCCGTCCTGGAGGGGTTTATAGAAGGACCTCTCAAGTTTCCACCAACATATAAGTTTGATGTTGGGACACACACTTATGACACGAGTGCTAAAAAGAGGAAGCCTGCGTGGACAGATCGGATCTTGTGGCGTCTGCGTAGGACAGGCTCCCCCGTCCCATCCCATAATTCAGCTCTGCAGCTCTCTCAGCACTTCTACTGCAGTCACATGGGCTTCACTATTAGTGATCACAAGCCAGTGTCTGCTCTTTTCTCTTTGCACTTTCCCTTTAAGGTGACCTTGCCATTAGTGACACTGGAAGTGGAGAAAGAATGGACCAAGTTCTCTGATGCAACAGTCAAACTCACAATGGCACATGGCTTTCAGAGGAGTTCATGGGACTGGGTGGGCCTGTACAAGGTGGGATTCAAACATCACAAGGATTATGCTGCTTATGTATGGGCCAAATCCGAGCATTCCACCCAGGTGGTATTTTCAGAGGAGGATCTGCCAAGAGACCCGGGGGAATATATTTTGGGATATTACAGTAACAACATGAACAGCATTGCAGGAGTAACAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143215

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00004807 lncRNA downstream 12646 7814644 ~ 7821542 (-) True XLOC_002583
TCONS_00004808 lncRNA downstream 13713 7814644 ~ 7820475 (-) False XLOC_002583
TCONS_00004806 lncRNA downstream 22434 7810664 ~ 7811754 (-) False XLOC_002583
TCONS_00004805 lncRNA downstream 22800 7810664 ~ 7811388 (-) False XLOC_002583
TCONS_00004803 lncRNA downstream 52166 7779638 ~ 7782022 (-) True XLOC_002582
TCONS_00005747 lncRNA upstream 26259 7883753 ~ 7886040 (-) False XLOC_002586
TCONS_00005748 lncRNA upstream 26519 7884013 ~ 7885937 (-) False XLOC_002586
TCONS_00004821 lncRNA upstream 118854 7976348 ~ 7979724 (-) False XLOC_002589
TCONS_00004822 lncRNA upstream 119475 7976969 ~ 7979995 (-) False XLOC_002589
TCONS_00005749 lncRNA upstream 123625 7981119 ~ 7983744 (-) True XLOC_002590
TCONS_00004804 mRNA downstream 12502 7810455 ~ 7821686 (-) False XLOC_002583
TCONS_00004802 mRNA downstream 48243 7778870 ~ 7785945 (-) False XLOC_002582
TCONS_00004801 mRNA downstream 48258 7778870 ~ 7785930 (-) False XLOC_002582
TCONS_00004800 mRNA downstream 61754 7769814 ~ 7772434 (-) True XLOC_002581
TCONS_00004799 mRNA downstream 77323 7738659 ~ 7756865 (-) True XLOC_002580
TCONS_00004812 mRNA upstream 17582 7875076 ~ 7892192 (-) False XLOC_002585
TCONS_00004814 mRNA upstream 26634 7884128 ~ 7885654 (-) True XLOC_002586
TCONS_00004815 mRNA upstream 43518 7901012 ~ 7909839 (-) False XLOC_002587
TCONS_00004816 mRNA upstream 44851 7902345 ~ 7913591 (-) True XLOC_002587
TCONS_00004817 mRNA upstream 59226 7916720 ~ 7974155 (-) False XLOC_002588
TCONS_00004790 other downstream 322065 7512008 ~ 7512123 (-) True XLOC_002575
TCONS_00004786 other downstream 482078 7290947 ~ 7352110 (-) True XLOC_002573
TCONS_00004780 other downstream 824698 7009374 ~ 7009490 (-) True XLOC_002570
TCONS_00004776 other downstream 1017422 6786333 ~ 6816766 (-) False XLOC_002568
TCONS_00004811 other upstream 13133 7870627 ~ 7892684 (-) False XLOC_002585
TCONS_00004813 other upstream 23835 7881329 ~ 7891866 (-) True XLOC_002585
TCONS_00004819 other upstream 72277 7929771 ~ 7959838 (-) True XLOC_002588
TCONS_00004848 other upstream 818396 8675890 ~ 8677828 (-) True XLOC_002605
TCONS_00004855 other upstream 1159227 9016721 ~ 9016837 (-) True XLOC_002609

Expression Profile

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