Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1996337 |
| length | 459 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | LOC110500591 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 46016422 ~ 46020567 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1996229 | lncRNA | upstream | 52270 | 45922506 ~ 45967783 (+) | True | G1743171 |
| TU1996274 | lncRNA | upstream | 89931 | 45928826 ~ 45930122 (+) | False | G1743202 |
| TU1996268 | lncRNA | upstream | 89931 | 45928903 ~ 45930122 (+) | False | G1743202 |
| TU1996261 | lncRNA | upstream | 90198 | 45928826 ~ 45929855 (+) | False | G1743202 |
| TU1996265 | lncRNA | upstream | 90198 | 45928826 ~ 45929855 (+) | False | G1743202 |
| TU1996756 | lncRNA | downstream | 148886 | 46169419 ~ 46171765 (+) | True | LOC110500595 |
| TU1996784 | lncRNA | downstream | 162767 | 46183300 ~ 46183714 (+) | True | G1743648 |
| TU1996790 | lncRNA | downstream | 170682 | 46191215 ~ 46192309 (+) | True | G1743654 |
| TU1996798 | lncRNA | downstream | 177966 | 46198499 ~ 46198707 (+) | True | G1743660 |
| TU1996761 | lncRNA | downstream | 186481 | 46207014 ~ 46210406 (+) | True | LOC110500598 |
| XM_021578003.2 | mRNA | upstream | 75183 | 45942157 ~ 45944870 (+) | True | LOC110500588 |
| XM_036957984.1 | mRNA | upstream | 131396 | 45869887 ~ 45888657 (+) | False | LOC110500584 |
| XM_036957985.1 | mRNA | upstream | 131396 | 45869887 ~ 45888657 (+) | False | LOC110500584 |
| XM_036957986.1 | mRNA | upstream | 131396 | 45869887 ~ 45888657 (+) | True | LOC110500584 |
| XM_021577999.2 | mRNA | upstream | 170046 | 45848186 ~ 45850007 (+) | True | cnpy4 |
| XM_021578013.2 | mRNA | downstream | 130908 | 46151441 ~ 46172393 (+) | False | LOC110500595 |
| XM_021578034.2 | mRNA | downstream | 181298 | 46201831 ~ 46207380 (+) | False | LOC110500598 |
| XM_021578021.2 | mRNA | downstream | 181305 | 46201838 ~ 46210557 (+) | False | LOC110500598 |
| XM_036957998.1 | mRNA | downstream | 196084 | 46216617 ~ 46266922 (+) | False | LOC110500597 |
| XM_036957995.1 | mRNA | downstream | 196126 | 46216659 ~ 46266922 (+) | False | LOC110500597 |
| TU1996124 | other | upstream | 310103 | 45707142 ~ 45709950 (+) | True | G1743077 |
| TU1996084 | other | upstream | 380311 | 45639296 ~ 45639742 (+) | True | G1743043 |
| TU1995371 | other | upstream | 464464 | 45549117 ~ 45555589 (+) | True | si:dkey-38p12.3 |
| TU1995333 | other | upstream | 526101 | 45485272 ~ 45493952 (+) | True | LOC110500870 |
| TU1995329 | other | upstream | 571366 | 45444527 ~ 45448687 (+) | True | fcer1g |
| TU1997842 | other | downstream | 1143371 | 47163904 ~ 47167654 (+) | True | G1744645 |
| TU1999487 | other | downstream | 2074234 | 48094767 ~ 48095119 (+) | True | G1746210 |
| TU1999753 | other | downstream | 2304567 | 48325100 ~ 48363926 (+) | True | G1746471 |
| TU2000589 | other | downstream | 2956793 | 48977326 ~ 48977758 (+) | True | G1747255 |
| TU2001181 | other | downstream | 3425306 | 49445839 ~ 49446626 (+) | True | G1747814 |
