RNA id: TCONS_00004811


Basic Information

Item Value
RNA id TCONS_00004811
length 795
RNA type processed_transcript
GC content 0.46
exon number 3
gene id XLOC_002585
representative False

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 7870627 ~ 7892684 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGTTTAGCTGATTAACAAAAGTAGCATCTCCACATGACTATATAGATTTATATGATAGATTTATATGAACTTATTACTGTAAACTGTACCAGTCATGTATAATTAAAATAGTCAAACAGTTATTAGTCAATAACTTACCGAACATCCAGTCGAACTCAAGGTTTCATTTCATCCACATCATAACAAACAATACCCGCCATTCACCACTAGATGGAGCCAAACACCCTTTCATTTTACACAAACCTCCATCACACGGTGCCATTGACACGTCTGGCCTCTGCTTCCTCAGATAAATGCTGCAAGCGTGTTTATGTCTCAGTTTCCTCTCCGAAAACGGTGAGCAGGTGAGTCACTGCTAGAGGGACGTCAGGACGCCAGCATTAGGACGCATCCCGttgactgatgtttttttttatttttccttctgAAGCCCGGCTCAGTCCCATGTGGCCAGGGTTAAAATGTCTGGCGGTTCGGCAGTCGGAGGCCCAAACACCAAAGATGTCAAACAGATGCTGCTGGACTGGTGCCGTGTGAAGACTGAGCCATATGAGGTGAGCCGTGACGCTCATCTGTTTAAAGCGCGAGAGATGCGCGTGACACCCTTCACCTCGAGACACTGCAGCCTATAAACAAGTGTCGTTGAACAAACAACTTCAAAAGACCTAAACAGCCTGATTCTCAAACAGACTTGCGTTTATCGCATGGGATGTCCACCCCGTTAGCTTGACAGGCGGTTAATTATCTCATCCGAAGCGCGGGCTCGATCGTGTCTAATTGACACGCGCCTATAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133964

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00004807 lncRNA downstream 49085 7814644 ~ 7821542 (-) True XLOC_002583
TCONS_00004808 lncRNA downstream 50152 7814644 ~ 7820475 (-) False XLOC_002583
TCONS_00004806 lncRNA downstream 58873 7810664 ~ 7811754 (-) False XLOC_002583
TCONS_00004805 lncRNA downstream 59239 7810664 ~ 7811388 (-) False XLOC_002583
TCONS_00004803 lncRNA downstream 88605 7779638 ~ 7782022 (-) True XLOC_002582
TCONS_00004821 lncRNA upstream 83664 7976348 ~ 7979724 (-) False XLOC_002589
TCONS_00004822 lncRNA upstream 84285 7976969 ~ 7979995 (-) False XLOC_002589
TCONS_00005749 lncRNA upstream 88435 7981119 ~ 7983744 (-) True XLOC_002590
TCONS_00004828 lncRNA upstream 152733 8045417 ~ 8046763 (-) True XLOC_002593
TCONS_00004840 lncRNA upstream 373587 8266271 ~ 8269833 (-) False XLOC_002599
TCONS_00004809 mRNA downstream 12074 7831439 ~ 7858553 (-) False XLOC_002584
TCONS_00004810 mRNA downstream 13133 7834188 ~ 7857494 (-) True XLOC_002584
TCONS_00004804 mRNA downstream 48941 7810455 ~ 7821686 (-) False XLOC_002583
TCONS_00004802 mRNA downstream 84682 7778870 ~ 7785945 (-) False XLOC_002582
TCONS_00004801 mRNA downstream 84697 7778870 ~ 7785930 (-) False XLOC_002582
TCONS_00004815 mRNA upstream 8328 7901012 ~ 7909839 (-) False XLOC_002587
TCONS_00004816 mRNA upstream 9661 7902345 ~ 7913591 (-) True XLOC_002587
TCONS_00004817 mRNA upstream 24036 7916720 ~ 7974155 (-) False XLOC_002588
TCONS_00004818 mRNA upstream 25334 7918018 ~ 7974155 (-) False XLOC_002588
TCONS_00004820 mRNA upstream 82901 7975585 ~ 7988417 (-) False XLOC_002589
TCONS_00004790 other downstream 358504 7512008 ~ 7512123 (-) True XLOC_002575
TCONS_00004786 other downstream 518517 7290947 ~ 7352110 (-) True XLOC_002573
TCONS_00004780 other downstream 861137 7009374 ~ 7009490 (-) True XLOC_002570
TCONS_00004775 other downstream 1045505 6786329 ~ 6825122 (-) False XLOC_002568
TCONS_00004819 other upstream 37087 7929771 ~ 7959838 (-) True XLOC_002588
TCONS_00004848 other upstream 783206 8675890 ~ 8677828 (-) True XLOC_002605
TCONS_00004855 other upstream 1124037 9016721 ~ 9016837 (-) True XLOC_002609
TCONS_00004856 other upstream 1144674 9037358 ~ 9089636 (-) False XLOC_002608
TCONS_00004859 other upstream 1248881 9141565 ~ 9141679 (-) True XLOC_002611