Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050697 |
| length | 665 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 6 |
| gene id | XLOC_025821 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 58167288 ~ 58185030 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005739 | mitochondrion | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-405 | Predicted to enable metal ion binding activity. Predicted to be active in mitochondrion. Is expressed in female organism. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 5. Orthologous to human UQCRC2 (ubiquinol-cytochrome c reductase core protein 2). |
| ensembl_id | ENSDART00000155874 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052388 | lncRNA | upstream | 29994 | 58136942 ~ 58137294 (+) | True | XLOC_025820 |
| TCONS_00052816 | lncRNA | upstream | 171741 | 57994378 ~ 57995547 (+) | True | XLOC_025816 |
| TCONS_00052815 | lncRNA | upstream | 180441 | 57981258 ~ 57986847 (+) | True | XLOC_025814 |
| TCONS_00052387 | lncRNA | upstream | 398622 | 57766624 ~ 57768666 (+) | True | XLOC_025809 |
| TCONS_00052814 | lncRNA | upstream | 526198 | 57636374 ~ 57641090 (+) | False | XLOC_025808 |
| TCONS_00052817 | lncRNA | downstream | 9826 | 58187987 ~ 58192699 (+) | True | XLOC_025822 |
| TCONS_00052818 | lncRNA | downstream | 10493 | 58188654 ~ 58193860 (+) | True | XLOC_025823 |
| TCONS_00052819 | lncRNA | downstream | 32214 | 58210375 ~ 58212686 (+) | False | XLOC_025824 |
| TCONS_00052820 | lncRNA | downstream | 33144 | 58211305 ~ 58212686 (+) | True | XLOC_025824 |
| TCONS_00052821 | lncRNA | downstream | 121877 | 58300038 ~ 58303363 (+) | False | XLOC_025826 |
| TCONS_00050696 | mRNA | upstream | 12799 | 58133227 ~ 58154489 (+) | False | XLOC_025820 |
| TCONS_00050695 | mRNA | upstream | 35764 | 58119571 ~ 58131524 (+) | True | XLOC_025819 |
| TCONS_00050694 | mRNA | upstream | 69815 | 58092212 ~ 58097473 (+) | True | XLOC_025818 |
| TCONS_00050691 | mRNA | upstream | 161150 | 57997980 ~ 58006138 (+) | False | XLOC_025817 |
| TCONS_00050693 | mRNA | upstream | 161155 | 57997996 ~ 58006133 (+) | True | XLOC_025817 |
| TCONS_00050701 | mRNA | downstream | 53399 | 58231560 ~ 58292496 (+) | True | XLOC_025825 |
| TCONS_00050703 | mRNA | downstream | 176691 | 58354852 ~ 58372651 (+) | True | XLOC_025828 |
| TCONS_00050704 | mRNA | downstream | 201289 | 58379450 ~ 58416968 (+) | False | XLOC_025829 |
| TCONS_00050705 | mRNA | downstream | 204411 | 58382572 ~ 58416867 (+) | True | XLOC_025829 |
| TCONS_00050706 | mRNA | downstream | 277267 | 58455428 ~ 58468835 (+) | True | XLOC_025831 |
| TCONS_00050692 | other | upstream | 168729 | 57997990 ~ 57998559 (+) | False | XLOC_025817 |
| TCONS_00050688 | other | upstream | 337369 | 57825939 ~ 57829919 (+) | True | XLOC_025812 |
| TCONS_00050682 | other | upstream | 527840 | 57636374 ~ 57639448 (+) | False | XLOC_025808 |
| TCONS_00050664 | other | upstream | 2683641 | 55483513 ~ 55483647 (+) | True | XLOC_025789 |
| TCONS_00050662 | other | upstream | 2868130 | 55299043 ~ 55299158 (+) | True | XLOC_025787 |
| TCONS_00050717 | other | downstream | 524159 | 58702320 ~ 58710755 (+) | True | XLOC_025845 |
