RNA id: trnay-gua-90


Basic Information

Item Value
RNA id trnay-gua-90
length 73
RNA type mRNA
GC content 0.52
exon number 2
gene id trnay-gua-90
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59618728 ~ 59618814 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ccttcgatagctcagttgttagagcggaggactgtagatccttaggtcgctggttcaaatccggctcgaagga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013384 lncRNA downstream 85510 59516262 ~ 59533218 (-) True G1758364
TU2013379 lncRNA downstream 103866 59514614 ~ 59514862 (-) True G1758362
TU2013326 lncRNA downstream 187971 59429126 ~ 59430757 (-) False G1758317
TU2013327 lncRNA downstream 187971 59429126 ~ 59430757 (-) True G1758317
TU2013322 lncRNA downstream 193713 59423685 ~ 59425015 (-) True G1758314
TU2013471 lncRNA upstream 414 59619228 ~ 59622300 (-) True G1758424
TU2013475 lncRNA upstream 15769 59634583 ~ 59637718 (-) True G1758428
TU2013457 lncRNA upstream 30195 59649009 ~ 59651669 (-) True G1758417
TU2013450 lncRNA upstream 55196 59674010 ~ 59685333 (-) False G1758412
TU2013448 lncRNA upstream 62083 59680897 ~ 59682907 (-) True G1758412
trnay-gua-89 mRNA downstream 590 59618052 ~ 59618138 (-) True trnay-gua-89
trnay-gua-88 mRNA downstream 1268 59617374 ~ 59617460 (-) True trnay-gua-88
trnay-gua-87 mRNA downstream 1946 59616696 ~ 59616782 (-) True trnay-gua-87
trnay-gua-86 mRNA downstream 2625 59616017 ~ 59616103 (-) True trnay-gua-86
trnay-gua-85 mRNA downstream 4560 59614082 ~ 59614168 (-) True trnay-gua-85
trnay-gua-91 mRNA upstream 759 59619573 ~ 59619659 (-) True trnay-gua-91
trnay-gua-92 mRNA upstream 1431 59620245 ~ 59620331 (-) True trnay-gua-92
trnay-gua-93 mRNA upstream 2110 59620924 ~ 59621010 (-) True trnay-gua-93
trnay-gua-94 mRNA upstream 2787 59621601 ~ 59621687 (-) True trnay-gua-94
trnay-gua-95 mRNA upstream 3465 59622279 ~ 59622365 (-) True trnay-gua-95
TU2013080 other downstream 423238 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 812903 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1575671 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1709594 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1716135 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 404953 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 503728 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 569596 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 740016 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 740611 60359425 ~ 60369982 (-) False LOC118942962