RNA id: trnar-ucu-85


Basic Information

Item Value
RNA id trnar-ucu-85
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-85
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59674575 ~ 59674647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013457 lncRNA downstream 22906 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 24436 59612668 ~ 59650139 (-) False G1758417
TU2013475 lncRNA downstream 36857 59634583 ~ 59637718 (-) True G1758428
TU2013471 lncRNA downstream 52275 59619228 ~ 59622300 (-) True G1758424
TU2013384 lncRNA downstream 141357 59516262 ~ 59533218 (-) True G1758364
TU2013448 lncRNA upstream 6250 59680897 ~ 59682907 (-) True G1758412
TU2013495 lncRNA upstream 24647 59699294 ~ 59704011 (-) True G1758445
TU2013504 lncRNA upstream 62494 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 187310 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 206680 59881327 ~ 59881658 (-) False G1758592
trnay-aua-4 mRNA downstream 1697 59672792 ~ 59672878 (-) True trnay-aua-4
trnay-gua-153 mRNA downstream 2374 59672115 ~ 59672201 (-) True trnay-gua-153
trnay-gua-152 mRNA downstream 3051 59671438 ~ 59671524 (-) True trnay-gua-152
trnay-gua-151 mRNA downstream 3728 59670761 ~ 59670847 (-) True trnay-gua-151
trnay-gua-150 mRNA downstream 4404 59670085 ~ 59670171 (-) True trnay-gua-150
trnar-ucu-86 mRNA upstream 2773 59677420 ~ 59677492 (-) True trnar-ucu-86
trnar-ucu-87 mRNA upstream 5230 59679877 ~ 59679949 (-) True trnar-ucu-87
trnar-ucu-88 mRNA upstream 6864 59681511 ~ 59681583 (-) True trnar-ucu-88
trnar-ucu-89 mRNA upstream 7965 59682612 ~ 59682684 (-) True trnar-ucu-89
trnar-ucu-90 mRNA upstream 8442 59683089 ~ 59683161 (-) True trnar-ucu-90
TU2013080 other downstream 479085 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 868750 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1631518 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1765441 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1771982 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 349120 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 447895 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 513763 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 684183 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 684778 60359425 ~ 60369982 (-) False LOC118942962