RNA id: trnar-ucu-89


Basic Information

Item Value
RNA id trnar-ucu-89
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-89
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59682612 ~ 59682684 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013457 lncRNA downstream 30943 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 32473 59612668 ~ 59650139 (-) False G1758417
TU2013475 lncRNA downstream 44894 59634583 ~ 59637718 (-) True G1758428
TU2013471 lncRNA downstream 60312 59619228 ~ 59622300 (-) True G1758424
TU2013384 lncRNA downstream 149394 59516262 ~ 59533218 (-) True G1758364
TU2013495 lncRNA upstream 16610 59699294 ~ 59704011 (-) True G1758445
TU2013504 lncRNA upstream 54457 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 179273 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 198643 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 198738 59881422 ~ 59881710 (-) False G1758592
trnar-ucu-88 mRNA downstream 1029 59681511 ~ 59681583 (-) True trnar-ucu-88
trnar-ucu-87 mRNA downstream 2663 59679877 ~ 59679949 (-) True trnar-ucu-87
trnar-ucu-86 mRNA downstream 5120 59677420 ~ 59677492 (-) True trnar-ucu-86
trnar-ucu-85 mRNA downstream 7965 59674575 ~ 59674647 (-) True trnar-ucu-85
trnay-aua-4 mRNA downstream 9734 59672792 ~ 59672878 (-) True trnay-aua-4
trnar-ucu-90 mRNA upstream 405 59683089 ~ 59683161 (-) True trnar-ucu-90
trnar-ucu-91 mRNA upstream 1412 59684096 ~ 59684168 (-) True trnar-ucu-91
trnar-ucu-92 mRNA upstream 2416 59685100 ~ 59685172 (-) True trnar-ucu-92
trnar-ucu-93 mRNA upstream 3419 59686103 ~ 59686175 (-) True trnar-ucu-93
trnar-ucu-94 mRNA upstream 4422 59687106 ~ 59687178 (-) True trnar-ucu-94
TU2013080 other downstream 487122 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 876787 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1639555 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1773478 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1780019 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 341083 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 439858 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 505726 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 676146 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 676741 60359425 ~ 60369982 (-) False LOC118942962