RNA id: trnar-ucu-90


Basic Information

Item Value
RNA id trnar-ucu-90
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-90
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59683089 ~ 59683161 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013448 lncRNA downstream 182 59680897 ~ 59682907 (-) True G1758412
TU2013457 lncRNA downstream 31420 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 32950 59612668 ~ 59650139 (-) False G1758417
TU2013475 lncRNA downstream 45371 59634583 ~ 59637718 (-) True G1758428
TU2013471 lncRNA downstream 60789 59619228 ~ 59622300 (-) True G1758424
TU2013495 lncRNA upstream 16133 59699294 ~ 59704011 (-) True G1758445
TU2013504 lncRNA upstream 53980 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 178796 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 198166 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 198261 59881422 ~ 59881710 (-) False G1758592
trnar-ucu-89 mRNA downstream 405 59682612 ~ 59682684 (-) True trnar-ucu-89
trnar-ucu-88 mRNA downstream 1506 59681511 ~ 59681583 (-) True trnar-ucu-88
trnar-ucu-87 mRNA downstream 3140 59679877 ~ 59679949 (-) True trnar-ucu-87
trnar-ucu-86 mRNA downstream 5597 59677420 ~ 59677492 (-) True trnar-ucu-86
trnar-ucu-85 mRNA downstream 8442 59674575 ~ 59674647 (-) True trnar-ucu-85
trnar-ucu-91 mRNA upstream 935 59684096 ~ 59684168 (-) True trnar-ucu-91
trnar-ucu-92 mRNA upstream 1939 59685100 ~ 59685172 (-) True trnar-ucu-92
trnar-ucu-93 mRNA upstream 2942 59686103 ~ 59686175 (-) True trnar-ucu-93
trnar-ucu-94 mRNA upstream 3945 59687106 ~ 59687178 (-) True trnar-ucu-94
trnar-ucu-95 mRNA upstream 4948 59688109 ~ 59688181 (-) True trnar-ucu-95
TU2013080 other downstream 487599 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 877264 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1640032 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1773955 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1780496 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 340606 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 439381 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 505249 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 675669 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 676264 60359425 ~ 60369982 (-) False LOC118942962