RNA id: trnar-ucu-92


Basic Information

Item Value
RNA id trnar-ucu-92
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-92
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59685100 ~ 59685172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013448 lncRNA downstream 2193 59680897 ~ 59682907 (-) True G1758412
TU2013457 lncRNA downstream 33431 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 34961 59612668 ~ 59650139 (-) False G1758417
TU2013495 lncRNA upstream 14122 59699294 ~ 59704011 (-) True G1758445
TU2013504 lncRNA upstream 51969 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 176785 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 196155 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 196250 59881422 ~ 59881710 (-) False G1758592
trnar-ucu-91 mRNA downstream 932 59684096 ~ 59684168 (-) True trnar-ucu-91
trnar-ucu-90 mRNA downstream 1939 59683089 ~ 59683161 (-) True trnar-ucu-90
trnar-ucu-89 mRNA downstream 2416 59682612 ~ 59682684 (-) True trnar-ucu-89
trnar-ucu-88 mRNA downstream 3517 59681511 ~ 59681583 (-) True trnar-ucu-88
trnar-ucu-87 mRNA downstream 5151 59679877 ~ 59679949 (-) True trnar-ucu-87
trnar-ucu-93 mRNA upstream 931 59686103 ~ 59686175 (-) True trnar-ucu-93
trnar-ucu-94 mRNA upstream 1934 59687106 ~ 59687178 (-) True trnar-ucu-94
trnar-ucu-95 mRNA upstream 2937 59688109 ~ 59688181 (-) True trnar-ucu-95
trnar-ucu-96 mRNA upstream 3935 59689107 ~ 59689179 (-) True trnar-ucu-96
trnar-ucu-97 mRNA upstream 4938 59690110 ~ 59690182 (-) True trnar-ucu-97
TU2013080 other downstream 489610 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 879275 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1642043 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1775966 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1782507 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 338595 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 437370 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 503238 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 673658 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 674253 60359425 ~ 60369982 (-) False LOC118942962