RNA id: trnar-ucu-99


Basic Information

Item Value
RNA id trnar-ucu-99
length 73
RNA type mRNA
GC content 0.56
exon number 1
gene id trnar-ucu-99
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59692111 ~ 59692183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccaggcattgtgggtttgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013450 lncRNA downstream 6778 59674010 ~ 59685333 (-) False G1758412
TU2013448 lncRNA downstream 9204 59680897 ~ 59682907 (-) True G1758412
TU2013457 lncRNA downstream 40442 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 41972 59612668 ~ 59650139 (-) False G1758417
TU2013495 lncRNA upstream 7111 59699294 ~ 59704011 (-) True G1758445
TU2013504 lncRNA upstream 44958 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 169774 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 189144 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 189239 59881422 ~ 59881710 (-) False G1758592
trnar-ucu-98 mRNA downstream 926 59691113 ~ 59691185 (-) True trnar-ucu-98
trnar-ucu-97 mRNA downstream 1929 59690110 ~ 59690182 (-) True trnar-ucu-97
trnar-ucu-96 mRNA downstream 2932 59689107 ~ 59689179 (-) True trnar-ucu-96
trnar-ucu-95 mRNA downstream 3930 59688109 ~ 59688181 (-) True trnar-ucu-95
trnar-ucu-94 mRNA downstream 4933 59687106 ~ 59687178 (-) True trnar-ucu-94
trnar-ucu-100 mRNA upstream 932 59693115 ~ 59693187 (-) True trnar-ucu-100
trnar-ucu-101 mRNA upstream 1936 59694119 ~ 59694191 (-) True trnar-ucu-101
trnar-ucu-102 mRNA upstream 2576 59694759 ~ 59694831 (-) True trnar-ucu-102
trnar-ucu-103 mRNA upstream 3216 59695399 ~ 59695471 (-) True trnar-ucu-103
trnar-ucu-104 mRNA upstream 4951 59697134 ~ 59697206 (-) True trnar-ucu-104
TU2013080 other downstream 496621 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 886286 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1649054 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1782977 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1789518 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 331584 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 430359 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 496227 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 666647 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 667242 60359425 ~ 60369982 (-) False LOC118942962