RNA id: trnar-ucu-108


Basic Information

Item Value
RNA id trnar-ucu-108
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-108
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59702249 ~ 59702321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013450 lncRNA downstream 16916 59674010 ~ 59685333 (-) False G1758412
TU2013448 lncRNA downstream 19342 59680897 ~ 59682907 (-) True G1758412
TU2013457 lncRNA downstream 50580 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 52110 59612668 ~ 59650139 (-) False G1758417
TU2013504 lncRNA upstream 34820 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 159636 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 179006 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 179101 59881422 ~ 59881710 (-) False G1758592
TU2013725 lncRNA upstream 179101 59881422 ~ 59881658 (-) True G1758592
trnar-ucu-107 mRNA downstream 931 59701246 ~ 59701318 (-) True trnar-ucu-107
trnar-ucu-106 mRNA downstream 2303 59699874 ~ 59699946 (-) True trnar-ucu-106
trnar-ucu-105 mRNA downstream 4039 59698138 ~ 59698210 (-) True trnar-ucu-105
trnar-ucu-104 mRNA downstream 5043 59697134 ~ 59697206 (-) True trnar-ucu-104
trnar-ucu-103 mRNA downstream 6778 59695399 ~ 59695471 (-) True trnar-ucu-103
trnar-ucu-109 mRNA upstream 932 59703253 ~ 59703325 (-) True trnar-ucu-109
trnar-ucu-110 mRNA upstream 1935 59704256 ~ 59704328 (-) True trnar-ucu-110
trnar-ucu-111 mRNA upstream 2938 59705259 ~ 59705331 (-) True trnar-ucu-111
trnar-ucu-112 mRNA upstream 3941 59706262 ~ 59706334 (-) True trnar-ucu-112
trnar-ucu-113 mRNA upstream 4944 59707265 ~ 59707337 (-) True trnar-ucu-113
TU2013080 other downstream 506759 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 896424 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1659192 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1793115 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1799656 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 321446 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 420221 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 486089 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 656509 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 657104 60359425 ~ 60369982 (-) False LOC118942962