RNA id: trnar-ucu-109


Basic Information

Item Value
RNA id trnar-ucu-109
length 73
RNA type mRNA
GC content 0.58
exon number 1
gene id trnar-ucu-109
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59703253 ~ 59703325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccagtggcctaatggataaggcactggccttctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2013450 lncRNA downstream 17920 59674010 ~ 59685333 (-) False G1758412
TU2013448 lncRNA downstream 20346 59680897 ~ 59682907 (-) True G1758412
TU2013457 lncRNA downstream 51584 59649009 ~ 59651669 (-) True G1758417
TU2013459 lncRNA downstream 53114 59612668 ~ 59650139 (-) False G1758417
TU2013504 lncRNA upstream 33816 59737141 ~ 59737451 (-) True trnar-ucu-120
TU2013718 lncRNA upstream 158632 59861957 ~ 59862860 (-) True G1758587
TU2013727 lncRNA upstream 178002 59881327 ~ 59881658 (-) False G1758592
TU2013724 lncRNA upstream 178097 59881422 ~ 59881710 (-) False G1758592
TU2013725 lncRNA upstream 178097 59881422 ~ 59881658 (-) True G1758592
trnar-ucu-108 mRNA downstream 932 59702249 ~ 59702321 (-) True trnar-ucu-108
trnar-ucu-107 mRNA downstream 1935 59701246 ~ 59701318 (-) True trnar-ucu-107
trnar-ucu-106 mRNA downstream 3307 59699874 ~ 59699946 (-) True trnar-ucu-106
trnar-ucu-105 mRNA downstream 5043 59698138 ~ 59698210 (-) True trnar-ucu-105
trnar-ucu-104 mRNA downstream 6047 59697134 ~ 59697206 (-) True trnar-ucu-104
trnar-ucu-110 mRNA upstream 931 59704256 ~ 59704328 (-) True trnar-ucu-110
trnar-ucu-111 mRNA upstream 1934 59705259 ~ 59705331 (-) True trnar-ucu-111
trnar-ucu-112 mRNA upstream 2937 59706262 ~ 59706334 (-) True trnar-ucu-112
trnar-ucu-113 mRNA upstream 3940 59707265 ~ 59707337 (-) True trnar-ucu-113
trnar-ucu-114 mRNA upstream 4943 59708268 ~ 59708340 (-) True trnar-ucu-114
TU2013080 other downstream 507763 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 897428 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 1660196 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 1794119 57908139 ~ 57909134 (-) True G1757074
TU2011872 other downstream 1800660 57902086 ~ 57902593 (-) True G1757073
TU2014036 other upstream 320442 60023767 ~ 60024903 (-) True G1758845
TU2014093 other upstream 419217 60122542 ~ 60123364 (-) True G1758890
TU2014124 other upstream 485085 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 655505 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 656100 60359425 ~ 60369982 (-) False LOC118942962