Item | Value |
---|---|
RNA id | TCONS_00004817 |
length | 3545 |
RNA type | mRNA |
GC content | 0.47 |
exon number | 14 |
gene id | XLOC_002588 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007121.7 |
NCBI id | CM002894.2 |
chromosome length | 45420867 |
location | 7916720 ~ 7974155 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006869 | lipid transport | biological_process |
GO:0097038 | perinuclear endoplasmic reticulum | cellular_component |
GO:0005829 | cytosol | cellular_component |
GO:0005886 | plasma membrane | cellular_component |
GO:0016020 | membrane | cellular_component |
GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
GO:0015485 | cholesterol binding | molecular_function |
GO:0015248 | sterol transporter activity | molecular_function |
GO:0032934 | sterol binding | molecular_function |
GO:0008289 | lipid binding | molecular_function |
id | description |
---|---|
ko04131 | Membrane trafficking |
id | description |
---|---|
ZDB-GENE-091113-18 | Predicted to enable cholesterol binding activity and sterol transporter activity. Predicted to act upstream of or within lipid transport. Predicted to be active in cytosol; perinuclear endoplasmic reticulum; and plasma membrane. Orthologous to human OSBP2 (oxysterol binding protein 2). |
ensembl_id | ENSDART00000147368 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00005747 | lncRNA | downstream | 30680 | 7883753 ~ 7886040 (-) | False | XLOC_002586 |
TCONS_00005748 | lncRNA | downstream | 30783 | 7884013 ~ 7885937 (-) | False | XLOC_002586 |
TCONS_00004807 | lncRNA | downstream | 95178 | 7814644 ~ 7821542 (-) | True | XLOC_002583 |
TCONS_00004808 | lncRNA | downstream | 96245 | 7814644 ~ 7820475 (-) | False | XLOC_002583 |
TCONS_00004806 | lncRNA | downstream | 104966 | 7810664 ~ 7811754 (-) | False | XLOC_002583 |
TCONS_00004821 | lncRNA | upstream | 2193 | 7976348 ~ 7979724 (-) | False | XLOC_002589 |
TCONS_00004822 | lncRNA | upstream | 2814 | 7976969 ~ 7979995 (-) | False | XLOC_002589 |
TCONS_00005749 | lncRNA | upstream | 6964 | 7981119 ~ 7983744 (-) | True | XLOC_002590 |
TCONS_00004828 | lncRNA | upstream | 71262 | 8045417 ~ 8046763 (-) | True | XLOC_002593 |
TCONS_00004840 | lncRNA | upstream | 292116 | 8266271 ~ 8269833 (-) | False | XLOC_002599 |
TCONS_00004816 | mRNA | downstream | 3129 | 7902345 ~ 7913591 (-) | True | XLOC_002587 |
TCONS_00004815 | mRNA | downstream | 6881 | 7901012 ~ 7909839 (-) | False | XLOC_002587 |
TCONS_00004812 | mRNA | downstream | 24528 | 7875076 ~ 7892192 (-) | False | XLOC_002585 |
TCONS_00004814 | mRNA | downstream | 31066 | 7884128 ~ 7885654 (-) | True | XLOC_002586 |
TCONS_00004809 | mRNA | downstream | 58167 | 7831439 ~ 7858553 (-) | False | XLOC_002584 |
TCONS_00004820 | mRNA | upstream | 1430 | 7975585 ~ 7988417 (-) | False | XLOC_002589 |
TCONS_00004823 | mRNA | upstream | 4925 | 7979080 ~ 7988396 (-) | True | XLOC_002589 |
TCONS_00004824 | mRNA | upstream | 14591 | 7988746 ~ 8033468 (-) | False | XLOC_002591 |
TCONS_00004825 | mRNA | upstream | 15350 | 7989505 ~ 8032885 (-) | True | XLOC_002591 |
TCONS_00004826 | mRNA | upstream | 60533 | 8034688 ~ 8041948 (-) | True | XLOC_002592 |
TCONS_00004811 | other | downstream | 24036 | 7870627 ~ 7892684 (-) | False | XLOC_002585 |
TCONS_00004813 | other | downstream | 24854 | 7881329 ~ 7891866 (-) | True | XLOC_002585 |
TCONS_00004790 | other | downstream | 404597 | 7512008 ~ 7512123 (-) | True | XLOC_002575 |
TCONS_00004786 | other | downstream | 564610 | 7290947 ~ 7352110 (-) | True | XLOC_002573 |
TCONS_00004780 | other | downstream | 907230 | 7009374 ~ 7009490 (-) | True | XLOC_002570 |
TCONS_00004848 | other | upstream | 701735 | 8675890 ~ 8677828 (-) | True | XLOC_002605 |
TCONS_00004855 | other | upstream | 1042566 | 9016721 ~ 9016837 (-) | True | XLOC_002609 |
TCONS_00004856 | other | upstream | 1063203 | 9037358 ~ 9089636 (-) | False | XLOC_002608 |
TCONS_00004859 | other | upstream | 1167410 | 9141565 ~ 9141679 (-) | True | XLOC_002611 |
TCONS_00004869 | other | upstream | 1560627 | 9534782 ~ 9538326 (-) | False | XLOC_002618 |