RNA id: TU1945630



Basic Information


Item Value
RNA id TU1945630
length 575
lncRNA type intronic
GC content 0.43
exon number 2
gene id G1700204
representative False

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 74586 ~ 75368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggaggttgttCTACAGTTATCCCAGTCTCTAACCCATAATAACCCCACATCAGGAGGTTGTTCTACAGTTATCCCAGTCTCTAACCCATAATAACCCCACATCAGGAGGTTGTTCTACAGTTATCCCAGTCTCTAACCCATAATAACCCACATCAGGAGGTTGTTCTACAGTTATCCCAGTCTCTAACCCATAATAACCCCACATCAGGAAGTTGTTCTACAGTTATGCCAGTCTCTAACCCATAATAACCCCACATCAGGAGGTTGTTCTACAGTTATCCCAGTCTCTAACCCATAATAACCCATAGAATCATCACCATGGAAACAGCTTATCATCTGCTCAACCTCTATTATTTATTTGtccatgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtgtatatgtgtttgaGGTCAGCTGTTCCAACAACATGGAAACTCATTCCACCAGTAGGTCTAACTAACGAGCAGTAAGAAACCATGTTTGGTCCAACACAAACCctgctacaacacacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1945646 lncRNA upstream 7047 82415 ~ 83331 (-) False G1700211
TU1945649 lncRNA upstream 7047 82415 ~ 82848 (-) False G1700211
TU1945650 lncRNA upstream 7047 82415 ~ 83331 (-) False G1700211
TU1945648 lncRNA upstream 7525 82893 ~ 83331 (-) True G1700211
TU1945661 lncRNA upstream 28603 103971 ~ 106830 (-) True G1700222
XR_005038451.1 mRNA upstream 185746 261114 ~ 265635 (-) False LOC118942822
XM_036956543.1 mRNA upstream 270605 345973 ~ 348985 (-) True LOC110517722
XR_005038452.1 mRNA upstream 506006 581374 ~ 583017 (-) False LOC118942823
XM_036958447.1 mRNA upstream 510367 585735 ~ 785374 (-) True cacna2d4a
XM_036956548.1 mRNA upstream 749222 824590 ~ 851763 (-) False LOC110516566
TU1945775 other upstream 277119 352487 ~ 354509 (-) True G1700312
TU1946269 other upstream 1243859 1319227 ~ 1323363 (-) True LOC110511372
TU1946284 other upstream 1293781 1369149 ~ 1445876 (-) True LOC118942825
TU1946685 other upstream 2047161 2122529 ~ 2123887 (-) True LOC110512520
TU1946724 other upstream 2113065 2188433 ~ 2189666 (-) True G1701041

Expression Profile