Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1945862 |
| length | 717 |
| lncRNA type | antisense_over |
| GC content | 0.52 |
| exon number | 4 |
| gene id | G1700385 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 542441 ~ 543472 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1945841 | lncRNA | downstream | 52620 | 488294 ~ 489821 (-) | True | G1700365 |
| TU1945784 | lncRNA | downstream | 129318 | 377209 ~ 413123 (-) | True | G1700319 |
| TU1945783 | lncRNA | downstream | 169588 | 370897 ~ 372853 (-) | True | G1700318 |
| TU1945770 | lncRNA | downstream | 187627 | 350194 ~ 354814 (-) | True | G1700310 |
| TU1945774 | lncRNA | downstream | 190000 | 351654 ~ 352441 (-) | True | G1700311 |
| TU1945881 | lncRNA | upstream | 1578 | 545050 ~ 587313 (-) | True | G1700392 |
| TU1945885 | lncRNA | upstream | 4840 | 548312 ~ 551242 (-) | False | G1700396 |
| TU1945888 | lncRNA | upstream | 4840 | 548312 ~ 550189 (-) | False | G1700396 |
| TU1945889 | lncRNA | upstream | 4840 | 548312 ~ 551242 (-) | False | G1700396 |
| TU1945886 | lncRNA | upstream | 5285 | 548757 ~ 551803 (-) | False | G1700396 |
| XM_036956543.1 | mRNA | downstream | 193456 | 345973 ~ 348985 (-) | True | LOC110517722 |
| XR_005038451.1 | mRNA | downstream | 276806 | 261114 ~ 265635 (-) | False | LOC118942822 |
| XR_005038452.1 | mRNA | upstream | 37902 | 581374 ~ 583017 (-) | False | LOC118942823 |
| XM_036958447.1 | mRNA | upstream | 42263 | 585735 ~ 785374 (-) | True | cacna2d4a |
| XM_036956548.1 | mRNA | upstream | 281118 | 824590 ~ 851763 (-) | False | LOC110516566 |
| XM_036956547.1 | mRNA | upstream | 281118 | 824590 ~ 851764 (-) | False | LOC110516566 |
| XM_036956549.1 | mRNA | upstream | 281118 | 824590 ~ 851766 (-) | False | LOC110516566 |
| TU1945775 | other | downstream | 187932 | 352487 ~ 354509 (-) | True | G1700312 |
| TU1946269 | other | upstream | 775755 | 1319227 ~ 1323363 (-) | True | LOC110511372 |
| TU1946284 | other | upstream | 825677 | 1369149 ~ 1445876 (-) | True | LOC118942825 |
| TU1946685 | other | upstream | 1579057 | 2122529 ~ 2123887 (-) | True | LOC110512520 |
| TU1946724 | other | upstream | 1644961 | 2188433 ~ 2189666 (-) | True | G1701041 |
| TU1947726 | other | upstream | 2029202 | 2572674 ~ 2575261 (-) | False | G1701824 |
