Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1946119 |
| length | 956 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | G1700584 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1021916 ~ 1024151 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1946118 | lncRNA | downstream | 185 | 1019670 ~ 1021731 (-) | True | G1700583 |
| TU1946117 | lncRNA | downstream | 2923 | 1017329 ~ 1018993 (-) | True | G1700582 |
| TU1946102 | lncRNA | downstream | 39566 | 981518 ~ 982350 (-) | True | G1700572 |
| TU1946058 | lncRNA | downstream | 121786 | 899771 ~ 900130 (-) | True | G1700534 |
| TU1946046 | lncRNA | downstream | 143614 | 875044 ~ 878302 (-) | True | G1700522 |
| TU1946097 | lncRNA | upstream | 9531 | 1033682 ~ 1034400 (-) | True | G1700569 |
| TU1946146 | lncRNA | upstream | 65697 | 1089848 ~ 1090221 (-) | True | G1700610 |
| TU1946148 | lncRNA | upstream | 74096 | 1098247 ~ 1103848 (-) | True | G1700612 |
| TU1946158 | lncRNA | upstream | 100423 | 1124574 ~ 1137671 (-) | True | G1700621 |
| TU1946204 | lncRNA | upstream | 180994 | 1205145 ~ 1205665 (-) | True | G1700658 |
| XM_036956549.1 | mRNA | downstream | 170150 | 824590 ~ 851766 (-) | False | LOC110516566 |
| XM_036956547.1 | mRNA | downstream | 170152 | 824590 ~ 851764 (-) | False | LOC110516566 |
| XM_036956548.1 | mRNA | downstream | 170153 | 824590 ~ 851763 (-) | False | LOC110516566 |
| XM_036958447.1 | mRNA | downstream | 236542 | 585735 ~ 785374 (-) | True | cacna2d4a |
| XR_005038452.1 | mRNA | downstream | 438899 | 581374 ~ 583017 (-) | False | LOC118942823 |
| XM_036956557.1 | mRNA | upstream | 295070 | 1319221 ~ 1347903 (-) | False | LOC110511372 |
| XM_036956556.1 | mRNA | upstream | 295070 | 1319221 ~ 1348497 (-) | False | LOC110511372 |
| XM_036956561.1 | mRNA | upstream | 324448 | 1348599 ~ 1354980 (-) | False | LOC110527029 |
| XM_036956558.1 | mRNA | upstream | 324448 | 1348599 ~ 1357031 (-) | False | LOC110527029 |
| XM_036956559.1 | mRNA | upstream | 324448 | 1348599 ~ 1357031 (-) | False | LOC110527029 |
| TU1945775 | other | downstream | 667407 | 352487 ~ 354509 (-) | True | G1700312 |
| TU1946269 | other | upstream | 295076 | 1319227 ~ 1323363 (-) | True | LOC110511372 |
| TU1946284 | other | upstream | 344998 | 1369149 ~ 1445876 (-) | True | LOC118942825 |
| TU1946685 | other | upstream | 1098378 | 2122529 ~ 2123887 (-) | True | LOC110512520 |
| TU1946724 | other | upstream | 1164282 | 2188433 ~ 2189666 (-) | True | G1701041 |
| TU1947726 | other | upstream | 1548523 | 2572674 ~ 2575261 (-) | False | G1701824 |
