Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1946097 |
| length | 626 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G1700569 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1033682 ~ 1034400 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1946119 | lncRNA | downstream | 9531 | 1021916 ~ 1024151 (-) | True | G1700584 |
| TU1946118 | lncRNA | downstream | 11951 | 1019670 ~ 1021731 (-) | True | G1700583 |
| TU1946117 | lncRNA | downstream | 14689 | 1017329 ~ 1018993 (-) | True | G1700582 |
| TU1946102 | lncRNA | downstream | 51332 | 981518 ~ 982350 (-) | True | G1700572 |
| TU1946058 | lncRNA | downstream | 133552 | 899771 ~ 900130 (-) | True | G1700534 |
| TU1946146 | lncRNA | upstream | 55448 | 1089848 ~ 1090221 (-) | True | G1700610 |
| TU1946148 | lncRNA | upstream | 63847 | 1098247 ~ 1103848 (-) | True | G1700612 |
| TU1946158 | lncRNA | upstream | 90174 | 1124574 ~ 1137671 (-) | True | G1700621 |
| TU1946204 | lncRNA | upstream | 170745 | 1205145 ~ 1205665 (-) | True | G1700658 |
| TU1946248 | lncRNA | upstream | 246685 | 1281085 ~ 1283069 (-) | True | G1700697 |
| XM_036956549.1 | mRNA | downstream | 181916 | 824590 ~ 851766 (-) | False | LOC110516566 |
| XM_036956547.1 | mRNA | downstream | 181918 | 824590 ~ 851764 (-) | False | LOC110516566 |
| XM_036956548.1 | mRNA | downstream | 181919 | 824590 ~ 851763 (-) | False | LOC110516566 |
| XM_036958447.1 | mRNA | downstream | 248308 | 585735 ~ 785374 (-) | True | cacna2d4a |
| XR_005038452.1 | mRNA | downstream | 450665 | 581374 ~ 583017 (-) | False | LOC118942823 |
| XM_036956557.1 | mRNA | upstream | 284821 | 1319221 ~ 1347903 (-) | False | LOC110511372 |
| XM_036956556.1 | mRNA | upstream | 284821 | 1319221 ~ 1348497 (-) | False | LOC110511372 |
| XM_036956561.1 | mRNA | upstream | 314199 | 1348599 ~ 1354980 (-) | False | LOC110527029 |
| XM_036956558.1 | mRNA | upstream | 314199 | 1348599 ~ 1357031 (-) | False | LOC110527029 |
| XM_036956559.1 | mRNA | upstream | 314199 | 1348599 ~ 1357031 (-) | False | LOC110527029 |
| TU1945775 | other | downstream | 679173 | 352487 ~ 354509 (-) | True | G1700312 |
| TU1946269 | other | upstream | 284827 | 1319227 ~ 1323363 (-) | True | LOC110511372 |
| TU1946284 | other | upstream | 334749 | 1369149 ~ 1445876 (-) | True | LOC118942825 |
| TU1946685 | other | upstream | 1088129 | 2122529 ~ 2123887 (-) | True | LOC110512520 |
| TU1946724 | other | upstream | 1154033 | 2188433 ~ 2189666 (-) | True | G1701041 |
| TU1947726 | other | upstream | 1538274 | 2572674 ~ 2575261 (-) | False | G1701824 |
