Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1949012 |
| length | 486 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1702762 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4971400 ~ 4971885 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1949011 | lncRNA | upstream | 135 | 4970944 ~ 4971265 (+) | True | G1702761 |
| TU1948993 | lncRNA | upstream | 27634 | 4936606 ~ 4943766 (+) | True | G1702745 |
| TU1948990 | lncRNA | upstream | 34876 | 4936306 ~ 4936524 (+) | True | G1702744 |
| TU1948915 | lncRNA | upstream | 113514 | 4857163 ~ 4857886 (+) | False | G1702695 |
| TU1949016 | lncRNA | downstream | 4502 | 4976387 ~ 4976865 (+) | False | G1702765 |
| TU1949017 | lncRNA | downstream | 4502 | 4976387 ~ 4976865 (+) | True | G1702765 |
| TU1949022 | lncRNA | downstream | 20522 | 4992407 ~ 5045122 (+) | True | G1702770 |
| TU1949044 | lncRNA | downstream | 41132 | 5013017 ~ 5013962 (+) | True | G1702784 |
| TU1949045 | lncRNA | downstream | 43572 | 5015457 ~ 5016002 (+) | True | G1702785 |
| XR_005038439.1 | mRNA | upstream | 118483 | 4851989 ~ 4852917 (+) | True | LOC118942787 |
| XR_005038458.1 | mRNA | upstream | 509829 | 4459746 ~ 4461571 (+) | True | LOC118942831 |
| XM_036956632.1 | mRNA | upstream | 511649 | 4451119 ~ 4459751 (+) | False | si:dkey-39a18.1 |
| XM_036956648.1 | mRNA | downstream | 26341 | 4998226 ~ 5111935 (+) | False | LOC118936571 |
| XM_036956649.1 | mRNA | downstream | 99688 | 5071573 ~ 5111935 (+) | True | LOC118936571 |
| XM_036956650.1 | mRNA | downstream | 148235 | 5120120 ~ 5173429 (+) | True | LOC110490690 |
| XM_036956651.1 | mRNA | downstream | 201775 | 5173660 ~ 5179939 (+) | False | LOC118942832 |
| XR_005038468.1 | mRNA | downstream | 201775 | 5173660 ~ 5179939 (+) | False | LOC118942832 |
| TU1948666 | other | upstream | 570419 | 4384056 ~ 4400981 (+) | True | LOC110516816 |
| TU1948694 | other | upstream | 575885 | 4394993 ~ 4395515 (+) | True | G1702554 |
| TU1947490 | other | upstream | 1035363 | 3932787 ~ 3936037 (+) | False | G1701654 |
| TU1947491 | other | upstream | 1035363 | 3932787 ~ 3936037 (+) | False | G1701654 |
| TU1947496 | other | upstream | 1035363 | 3933930 ~ 3936037 (+) | False | G1701654 |
| TU1949056 | other | downstream | 80562 | 5052447 ~ 5054464 (+) | True | G1702793 |
| TU1948974 | other | downstream | 212589 | 5184474 ~ 5188847 (+) | True | LOC110516940 |
| TU1949137 | other | downstream | 282280 | 5254165 ~ 5254885 (+) | False | G1702856 |
| TU1949138 | other | downstream | 282280 | 5254165 ~ 5254885 (+) | True | G1702856 |
| TU1949920 | other | downstream | 613646 | 5585531 ~ 5596428 (+) | True | LOC110511233 |
