RNA id: TU1949687



Basic Information


Item Value
RNA id TU1949687
length 702
RNA type TUCP
GC content 0.49
exon number 5
gene id G1703190
representative True

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5200387 ~ 5202057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TCTCACAGCCAACACAAAGATCACTGTGAAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGTGAAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGTGAAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGGAGGGGAAAGCCATGACAACCAACACTAAGATCACTGTGGAGGGGAATGCCATGACAACCCAGACTAAGATCACTGTGAAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGTGAAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGTGGAGGGGAAAGCCATGACAACCCAGACTAAGATCACTGTGGAGGGGAAAGCCATTATAGCTAGAAGTACTAGATTGGAGGCTTGTCAGGTGGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTAGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTAGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTGGAGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTAGGGGAAGGTTTAGTGTTAGATTGGAGGCTTGTCAGGTAGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTAGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTGGGGGAAGGTTTAGTACTAGATTGGAGGCTTGTCAGGTGGGGGAAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1949688 lncRNA downstream 69 5200387 ~ 5200758 (-) False G1703190
TU1949662 lncRNA downstream 19754 5180674 ~ 5181073 (-) True G1703185
TU1949661 lncRNA downstream 20915 5179227 ~ 5179912 (-) True G1703184
TU1949660 lncRNA downstream 23824 5175237 ~ 5177003 (-) True G1703183
TU1949651 lncRNA downstream 71850 5128437 ~ 5128977 (-) True G1703174
TU1949664 lncRNA upstream 802 5202859 ~ 5213131 (-) False LOC110518655
TU1949666 lncRNA upstream 802 5202859 ~ 5213131 (-) False LOC110518655
TU1949671 lncRNA upstream 952 5203009 ~ 5213131 (-) False LOC110518655
TU1949675 lncRNA upstream 952 5203009 ~ 5213131 (-) True LOC110518655
TU1949691 lncRNA upstream 3961 5206018 ~ 5206870 (-) True G1703191
XM_036958452.1 mRNA downstream 140509 5052618 ~ 5060318 (-) True LOC118942989
XM_036956647.1 mRNA downstream 230436 4932216 ~ 4970391 (-) False LOC118936570
XM_036956643.1 mRNA downstream 230438 4932216 ~ 4970389 (-) False LOC118936570
XR_005038460.1 mRNA downstream 230438 4932216 ~ 4970389 (-) False LOC118936570
XR_005038461.1 mRNA downstream 230438 4932216 ~ 4970389 (-) False LOC118936570
XM_036956662.1 mRNA upstream 757 5202814 ~ 5223352 (-) False LOC110518655
XM_036956655.1 mRNA upstream 757 5202814 ~ 5223353 (-) False LOC110518655
XM_036956658.1 mRNA upstream 757 5202814 ~ 5223353 (-) False LOC110518655
XM_036956661.1 mRNA upstream 757 5202814 ~ 5223353 (-) False LOC110518655
XM_036956665.1 mRNA upstream 757 5202814 ~ 5223353 (-) False LOC110518655
TU1949491 other downstream 230472 4967580 ~ 4970355 (-) True LOC118936570
TU1949495 other downstream 234808 4961982 ~ 4966019 (-) False LOC118936570
TU1949528 other downstream 253416 4946598 ~ 4947411 (-) True G1703085
TU1949475 other downstream 266838 4932214 ~ 4933989 (-) False LOC118936570
TU1949706 other upstream 30578 5232635 ~ 5235225 (-) True G1703200
TU1949704 other upstream 35351 5237408 ~ 5312973 (-) True LOC118942834
TU1949830 other upstream 218279 5420336 ~ 5426592 (-) True LOC118942837
TU1949859 other upstream 227411 5429468 ~ 5430172 (-) True G1703323
TU1949828 other upstream 250891 5452948 ~ 5456111 (-) True LOC110491889

Expression Profile