Item | Value |
---|---|
RNA id | TU1950571 |
length | 928 |
lncRNA type | inter_gene |
GC content | 0.39 |
exon number | 3 |
gene id | G1703786 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 6191930 ~ 6193531 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1950182 | lncRNA | upstream | 23575 | 6167167 ~ 6168355 (+) | True | G1703537 |
TU1950170 | lncRNA | upstream | 45532 | 6145532 ~ 6146398 (+) | True | G1703527 |
TU1950142 | lncRNA | upstream | 123475 | 6067963 ~ 6068455 (+) | True | G1703503 |
TU1950140 | lncRNA | upstream | 123692 | 6067461 ~ 6068238 (+) | False | G1703503 |
TU1950141 | lncRNA | upstream | 123692 | 6067963 ~ 6068238 (+) | False | G1703503 |
TU1950579 | lncRNA | downstream | 9760 | 6203291 ~ 6213722 (+) | False | G1703792 |
TU1950581 | lncRNA | downstream | 9760 | 6203291 ~ 6227144 (+) | False | G1703792 |
TU1950583 | lncRNA | downstream | 9760 | 6203291 ~ 6227144 (+) | False | G1703792 |
TU1950584 | lncRNA | downstream | 9760 | 6203291 ~ 6227144 (+) | False | G1703792 |
TU1950586 | lncRNA | downstream | 9760 | 6203291 ~ 6227144 (+) | False | G1703792 |
XM_036956687.1 | mRNA | upstream | 198140 | 5986775 ~ 5993790 (+) | False | LOC110527635 |
XM_036956688.1 | mRNA | upstream | 198140 | 5986775 ~ 5993790 (+) | True | LOC110527635 |
XM_036956689.1 | mRNA | upstream | 205289 | 5979407 ~ 5986641 (+) | False | LOC118942842 |
XM_036956489.1 | mRNA | downstream | 34550 | 6228081 ~ 6252333 (+) | False | mrps33 |
NM_001171863.1 | mRNA | downstream | 34670 | 6228201 ~ 6251678 (+) | False | mrps33 |
XM_036956701.1 | mRNA | downstream | 66282 | 6259813 ~ 6300981 (+) | False | LOC110500907 |
XM_036956699.1 | mRNA | downstream | 66286 | 6259817 ~ 6304321 (+) | False | LOC110500907 |
XM_036956700.1 | mRNA | downstream | 66288 | 6259819 ~ 6304321 (+) | False | LOC110500907 |
TU1950048 | other | upstream | 197120 | 5983345 ~ 5994810 (+) | True | G1703427 |
TU1949988 | other | upstream | 474229 | 5717199 ~ 5717701 (+) | True | G1703391 |
TU1949920 | other | upstream | 595502 | 5585531 ~ 5596428 (+) | True | LOC110511233 |
TU1949137 | other | upstream | 937045 | 5254165 ~ 5254885 (+) | False | G1702856 |
TU1950617 | other | downstream | 34583 | 6228114 ~ 6252320 (+) | False | mrps33 |
TU1950618 | other | downstream | 34583 | 6228114 ~ 6252320 (+) | False | mrps33 |
TU1950619 | other | downstream | 34583 | 6228114 ~ 6252320 (+) | False | mrps33 |
TU1950620 | other | downstream | 34583 | 6228114 ~ 6252320 (+) | False | mrps33 |
TU1950621 | other | downstream | 34583 | 6228114 ~ 6252320 (+) | False | mrps33 |