RNA id: TU1951850



Basic Information


Item Value
RNA id TU1951850
length 251
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G1704734
representative True

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7397177 ~ 7397506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ataacatgtataactccagagagagagttgataacatgtATAACTctagagagagcgttgataacatgtataactctagagagagcgttgataacatgtataactctagctacgtagtggtcaggcagagagagcgttgataacatgtataactctagctacgtagtggtcaggcagagagagcgttgataacatgtataactctagctacgtagcggtcaggcagagagagcgttgataacatgtataac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1951848 lncRNA downstream 1361 7392237 ~ 7395816 (-) False G1704733
TU1951847 lncRNA downstream 4578 7392237 ~ 7392599 (-) False G1704733
TU1951806 lncRNA downstream 14915 7381761 ~ 7382262 (-) True LOC118942848
TU1951843 lncRNA downstream 19954 7376774 ~ 7377223 (-) True G1704729
TU1951834 lncRNA downstream 32916 7361391 ~ 7364261 (-) True G1704722
TU1951860 lncRNA upstream 9592 7407098 ~ 7407954 (-) True G1704739
TU1951869 lncRNA upstream 34244 7431750 ~ 7432166 (-) True G1704747
TU1951880 lncRNA upstream 67577 7465083 ~ 7465717 (-) True G1704756
TU1951884 lncRNA upstream 71044 7468550 ~ 7469306 (-) True G1704759
TU1951891 lncRNA upstream 85619 7483125 ~ 7483514 (-) True G1704765
XM_036956710.1 mRNA downstream 12738 7380579 ~ 7384439 (-) False LOC118942848
XM_036956709.1 mRNA downstream 89780 7303605 ~ 7307397 (-) True LOC118942847
XM_036956708.1 mRNA downstream 346270 7048896 ~ 7050907 (-) True LOC118942846
XM_036956706.1 mRNA downstream 479641 6890523 ~ 6917536 (-) False LOC118942845
XM_036956721.1 mRNA upstream 193022 7590528 ~ 7679878 (-) False LOC118936572
XM_036956718.1 mRNA upstream 193022 7590528 ~ 7768302 (-) False LOC118936572
XM_036956719.1 mRNA upstream 193022 7590528 ~ 7768302 (-) False LOC118936572
XM_036956717.1 mRNA upstream 193022 7590528 ~ 7768303 (-) False LOC118936572
XM_036956720.1 mRNA upstream 193022 7590528 ~ 7768303 (-) False LOC118936572
TU1951803 other downstream 15718 7379889 ~ 7381459 (-) False LOC118942848
TU1951838 other downstream 31037 7365547 ~ 7366140 (-) True G1704726
TU1951802 other downstream 95332 7299200 ~ 7301845 (-) True G1704700
TU1951804 other downstream 98091 7297925 ~ 7299086 (-) True G1704702
TU1951412 other downstream 240120 7156690 ~ 7157057 (-) True G1704412
TU1951903 other upstream 191030 7588536 ~ 7601354 (-) False LOC118936572
TU1951902 other upstream 204296 7601802 ~ 7621841 (-) False LOC118936572
TU1951911 other upstream 260042 7657548 ~ 7768016 (-) True LOC118936572
TU1952105 other upstream 543643 7941149 ~ 7962240 (-) True G1704927
TU1952076 other upstream 591195 7988701 ~ 8002994 (-) True LOC110515713

Expression Profile