Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004834 |
| length | 920 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | XLOC_002595 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 8058850 ~ 8079830 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005765 | lysosomal membrane | cellular_component |
| GO:0000421 | autophagosome membrane | cellular_component |
| GO:0032266 | phosphatidylinositol-3-phosphate binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-071004-101 | Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in ventral habenular nucleus. |
| ensembl_id | ENSDART00000059014 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004828 | lncRNA | downstream | 31206 | 8045417 ~ 8046763 (-) | True | XLOC_002593 |
| TCONS_00005749 | lncRNA | downstream | 94225 | 7981119 ~ 7983744 (-) | True | XLOC_002590 |
| TCONS_00004822 | lncRNA | downstream | 97974 | 7976969 ~ 7979995 (-) | False | XLOC_002589 |
| TCONS_00004821 | lncRNA | downstream | 98245 | 7976348 ~ 7979724 (-) | False | XLOC_002589 |
| TCONS_00005748 | lncRNA | downstream | 192032 | 7884013 ~ 7885937 (-) | False | XLOC_002586 |
| TCONS_00004840 | lncRNA | upstream | 186534 | 8266271 ~ 8269833 (-) | False | XLOC_002599 |
| TCONS_00005997 | lncRNA | upstream | 538981 | 8618718 ~ 8621543 (-) | False | XLOC_002602 |
| TCONS_00004846 | lncRNA | upstream | 539112 | 8618849 ~ 8621273 (-) | True | XLOC_002602 |
| TCONS_00005998 | lncRNA | upstream | 559184 | 8638921 ~ 8657677 (-) | True | XLOC_002603 |
| TCONS_00005999 | lncRNA | upstream | 761961 | 8841698 ~ 8858549 (-) | False | XLOC_002606 |
| TCONS_00004832 | mRNA | downstream | 17393 | 8059201 ~ 8060576 (-) | False | XLOC_002595 |
| TCONS_00004833 | mRNA | downstream | 17396 | 8059203 ~ 8060573 (-) | False | XLOC_002595 |
| TCONS_00004829 | mRNA | downstream | 24216 | 8051616 ~ 8053753 (-) | False | XLOC_002594 |
| TCONS_00004830 | mRNA | downstream | 24584 | 8052002 ~ 8053385 (-) | True | XLOC_002594 |
| TCONS_00004827 | mRNA | downstream | 31205 | 8045364 ~ 8046764 (-) | False | XLOC_002593 |
| TCONS_00004835 | mRNA | upstream | 48637 | 8128374 ~ 8129456 (-) | False | XLOC_002596 |
| TCONS_00004836 | mRNA | upstream | 48697 | 8128434 ~ 8129175 (-) | True | XLOC_002596 |
| TCONS_00004837 | mRNA | upstream | 66611 | 8146348 ~ 8153043 (-) | True | XLOC_002597 |
| TCONS_00004838 | mRNA | upstream | 75137 | 8154874 ~ 8197049 (-) | True | XLOC_002598 |
| TCONS_00004839 | mRNA | upstream | 186235 | 8265972 ~ 8295294 (-) | False | XLOC_002599 |
| TCONS_00004819 | other | downstream | 118131 | 7929771 ~ 7959838 (-) | True | XLOC_002588 |
| TCONS_00004811 | other | downstream | 185285 | 7870627 ~ 7892684 (-) | False | XLOC_002585 |
| TCONS_00004813 | other | downstream | 186103 | 7881329 ~ 7891866 (-) | True | XLOC_002585 |
| TCONS_00004790 | other | downstream | 565846 | 7512008 ~ 7512123 (-) | True | XLOC_002575 |
| TCONS_00004786 | other | downstream | 725859 | 7290947 ~ 7352110 (-) | True | XLOC_002573 |
| TCONS_00004848 | other | upstream | 596153 | 8675890 ~ 8677828 (-) | True | XLOC_002605 |
| TCONS_00004855 | other | upstream | 936984 | 9016721 ~ 9016837 (-) | True | XLOC_002609 |
| TCONS_00004856 | other | upstream | 957621 | 9037358 ~ 9089636 (-) | False | XLOC_002608 |
| TCONS_00004859 | other | upstream | 1061828 | 9141565 ~ 9141679 (-) | True | XLOC_002611 |
| TCONS_00004869 | other | upstream | 1455045 | 9534782 ~ 9538326 (-) | False | XLOC_002618 |
