RNA id: TU1955094



Basic Information


Item Value
RNA id TU1955094
length 304
lncRNA type intronic
GC content 0.50
exon number 2
gene id G1706999
representative True

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10384741 ~ 10385158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgtgtgtgtgtgtgtgtgtgtgtgtgttgctgtcagATGATGTCTGGTTCCTCAAAGTGCCCTGGAGGCTGAAGGAGGTTGTTCTAGGTTAGTCACCACTCTGACGTCAGATACTGTTACAGTATCATGTTAcctgagggtggaggaggagtcagactgttatcatgttacctgagggtggaggaggagtcaGACTGTTATCATGTTACctgagggtggaggaggagtcagactgttatcatgttacctgagggtggaggaggagtcagactgttatcatgttatctgagggcagaggaggag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1955089 lncRNA downstream 14559 10369167 ~ 10370182 (-) True G1706994
TU1955076 lncRNA downstream 33953 10349660 ~ 10350788 (-) True G1706985
TU1955071 lncRNA downstream 43609 10340702 ~ 10341132 (-) True G1706981
TU1955070 lncRNA downstream 45789 10338466 ~ 10338952 (-) True G1706980
TU1955062 lncRNA downstream 49584 10334796 ~ 10335157 (-) True G1706975
TU1954746 lncRNA upstream 21122 10406280 ~ 10407509 (-) False LOC118942872
TU1955104 lncRNA upstream 22910 10408068 ~ 10408488 (-) True G1707009
TU1955105 lncRNA upstream 23334 10408492 ~ 10409335 (-) True G1707010
TU1954747 lncRNA upstream 103535 10488693 ~ 10491064 (-) True LOC118942872
TU1955130 lncRNA upstream 111515 10496673 ~ 10507408 (-) True G1707034
XR_005038522.1 mRNA downstream 255488 10128070 ~ 10129253 (-) True LOC118942871
XR_005038513.1 mRNA downstream 323589 9957157 ~ 10061152 (-) False LOC118942869
XM_036958461.1 mRNA upstream 324 10385482 ~ 10387576 (-) True LOC118942997
XM_036956821.1 mRNA upstream 21020 10406178 ~ 10491072 (-) False LOC118942872
XM_036956844.1 mRNA upstream 411399 10796557 ~ 10897354 (-) False LOC110499727
XM_036956840.1 mRNA upstream 411399 10796557 ~ 10897355 (-) False LOC110499727
XM_036956841.1 mRNA upstream 411399 10796557 ~ 10897355 (-) False LOC110499727
TU1955088 other downstream 16302 10367884 ~ 10368439 (-) True G1706993
TU1955083 other downstream 23766 10360424 ~ 10360975 (-) True G1706990
TU1953656 other downstream 741800 9641950 ~ 9642941 (-) True G1705975
TU1953431 other downstream 910387 9468623 ~ 9474354 (-) True LOC110515809
TU1953378 other downstream 1107667 9274597 ~ 9277074 (-) True LOC118942865
TU1955159 other upstream 145459 10530617 ~ 10531271 (-) True G1707057
TU1955302 other upstream 435766 10820924 ~ 10897321 (-) True LOC110499727
TU1955400 other upstream 579677 10964835 ~ 10997654 (-) False LOC110518048
TU1955395 other upstream 579882 10965040 ~ 10997654 (-) False LOC110518048
TU1955453 other upstream 633868 11019026 ~ 11021038 (-) True G1707276

Expression Profile