RNA id: TCONS_00004837


Basic Information

Item Value
RNA id TCONS_00004837
length 1743
RNA type mRNA
GC content 0.44
exon number 5
gene id XLOC_002597
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8146348 ~ 8153043 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTACATTGACAACAGCCTAACAATGACATGAAGCAGCCTAGGCAAACAAGTGTTTATCTAAATAGAAGCCAGTGCGCCAAAAACATCGTCACTATTCTTCTATTATAATTAAACTATGGTCCATTTTCTTGTGACGTTCTCCAAAAACGGCTGTATTGGCATACCTGTGAAGTTTTTATGCTGTTGTTGTTATGGTTGACAACGCGGTGCCTCGTTGAGTAGTTTGGCGCTGAAATGAACTGTCGCTCTAAAGGCGCGCACTCCTGGCGCTCGTCGCACCTGACGACAAACGGTCGCGCTGTCACGTCACTCACTTCAGCTCTGACTCTGAGCACAAACTGAACATCACGCTATGCAGACCTGCTTCTACACTCCGCTGCCCTGTCTGATGGATAATGCAGTGACTCCAGTCAACCAGTCTTATAATGAAGACCTTCTGAGCTTTGCCACAGGGGAGTATCAATCCACAGAAACACATTTAATGACACATGAAGTGTCCAACCACACAGATCTGGATCTCTCTTTAGAGCTCAACAGACAGCTTCATGCCACACTCAGGAGAAAGCAAGAGGAAATATCTGCCCTAAAGGAGACCAATGCTCACCTGAAAAACCTGACTAAACAGACTGAATATTACGCCACAATACTAGAtGCCCTGACAACATCGTTCCAGACAGACTCGCTGTCACAGTGCACTAATGAGTGGCTGAATGAAGATCATTCTCCAGAGCACTCCTGGATCTCTCTGCTGACTCAAGAGCAGCCATCAGATCCATCTTCCACAGCTTTAACTAACTCCAGCGCTGACACACAGAGCCCAGCATCAGAGGTCAAGCAGCATCTGTGGTCCAGCTGGATTGACCTTCTGTGTGGAGATGCTGAGGACTGTCCTACAGGCTCTAAGCGAATCAGGTTTGATAATGAACTTGAACAGCTTGATTTGAAGGCCCAGGATCAAATGGTTCCTGAGGATGTAACTAAAGAGTCAACCTTGGCTCAGGATCATCACCTTACGATGTCCTCTGAAAGGCAGAGGGTGAACATATTTGGGGCTTTTAATGGGTTTCAGGTTTTTACTGAAACCTCAACAGTCAAGTCTGATATAAACATCAGCAGCGATGGTGGGAAAGGTTTGTGTTTTAAGACCTCAATCAGAGACCATAGTACAGTAAAGACCAAGGTTTTCCCACATGGCAAGGCATTCACCTCTCACACACTAAGTGGATCCTGTCGGTTCCTTTGGGTTCCTAATGAGAGCTGAACCTAGGTGACTCGAATTGTTGAGTGAGTTGAAAAACTAACAGCATTTCATGTAGAGCCAAGGTGTTTTGTCCAGCTAAGACCAACCAAAGTACTTCATGTCCTGTAATCATGACACATCATTATGTGTACATAAACATGAGTCACATGACCTTCTCTGTGAAGATGCTAAAGCTCAGGCTTGATAATAACGTTGTACAACTAGATGTGAAATATCTGAAGAGCCAGGCTTTTATTTGACCTAAGATTGTTTCAGTACAATCTTTAAAAGTTATCTCACAGGCTCTTCCATGGAGCATCCATAGAACCATTTCACTCATTTAAATGGAAAAAGGTACTTCAGATTAGATTCAGAGTAGGACAAAAAATAGAACCCCCGACAGGTTTTGTGAAAACGCATACAAATGCCTTAAACTCGGAGGTGTtggatgaaaaatacagactgtggaatgagtttttaacagaaatattctgtaggttaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192716

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00004828 lncRNA downstream 99585 8045417 ~ 8046763 (-) True XLOC_002593
TCONS_00005749 lncRNA downstream 162604 7981119 ~ 7983744 (-) True XLOC_002590
TCONS_00004822 lncRNA downstream 166353 7976969 ~ 7979995 (-) False XLOC_002589
TCONS_00004821 lncRNA downstream 166624 7976348 ~ 7979724 (-) False XLOC_002589
TCONS_00005748 lncRNA downstream 260411 7884013 ~ 7885937 (-) False XLOC_002586
TCONS_00004840 lncRNA upstream 113228 8266271 ~ 8269833 (-) False XLOC_002599
TCONS_00005997 lncRNA upstream 465675 8618718 ~ 8621543 (-) False XLOC_002602
TCONS_00004846 lncRNA upstream 465806 8618849 ~ 8621273 (-) True XLOC_002602
TCONS_00005998 lncRNA upstream 485878 8638921 ~ 8657677 (-) True XLOC_002603
TCONS_00005999 lncRNA upstream 688655 8841698 ~ 8858549 (-) False XLOC_002606
TCONS_00004835 mRNA downstream 16892 8128374 ~ 8129456 (-) False XLOC_002596
TCONS_00004836 mRNA downstream 17173 8128434 ~ 8129175 (-) True XLOC_002596
TCONS_00004831 mRNA downstream 66518 8058850 ~ 8079830 (-) False XLOC_002595
TCONS_00004834 mRNA downstream 66611 8077969 ~ 8079737 (-) True XLOC_002595
TCONS_00004832 mRNA downstream 85772 8059201 ~ 8060576 (-) False XLOC_002595
TCONS_00004838 mRNA upstream 1831 8154874 ~ 8197049 (-) True XLOC_002598
TCONS_00004839 mRNA upstream 112929 8265972 ~ 8295294 (-) False XLOC_002599
TCONS_00004841 mRNA upstream 113328 8266371 ~ 8282815 (-) False XLOC_002599
TCONS_00004842 mRNA upstream 113328 8266371 ~ 8294965 (-) False XLOC_002599
TCONS_00004843 mRNA upstream 121032 8274075 ~ 8295342 (-) True XLOC_002599
TCONS_00004819 other downstream 186510 7929771 ~ 7959838 (-) True XLOC_002588
TCONS_00004811 other downstream 253664 7870627 ~ 7892684 (-) False XLOC_002585
TCONS_00004813 other downstream 254482 7881329 ~ 7891866 (-) True XLOC_002585
TCONS_00004790 other downstream 634225 7512008 ~ 7512123 (-) True XLOC_002575
TCONS_00004786 other downstream 794238 7290947 ~ 7352110 (-) True XLOC_002573
TCONS_00004848 other upstream 522847 8675890 ~ 8677828 (-) True XLOC_002605
TCONS_00004855 other upstream 863678 9016721 ~ 9016837 (-) True XLOC_002609
TCONS_00004856 other upstream 884315 9037358 ~ 9089636 (-) False XLOC_002608
TCONS_00004859 other upstream 988522 9141565 ~ 9141679 (-) True XLOC_002611
TCONS_00004869 other upstream 1381739 9534782 ~ 9538326 (-) False XLOC_002618

Expression Profile

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