Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1968056 |
| length | 304 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1717790 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23261335 ~ 23261638 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1968055 | lncRNA | upstream | 286 | 23260145 ~ 23261049 (+) | True | G1717789 |
| TU1968053 | lncRNA | upstream | 3273 | 23257837 ~ 23258062 (+) | True | G1717787 |
| TU1968052 | lncRNA | upstream | 3750 | 23257382 ~ 23257585 (+) | True | G1717786 |
| TU1968012 | lncRNA | upstream | 51937 | 23198038 ~ 23209398 (+) | True | G1717749 |
| TU1968011 | lncRNA | upstream | 61739 | 23198728 ~ 23199596 (+) | True | G1717748 |
| TU1968057 | lncRNA | downstream | 32 | 23261670 ~ 23261872 (+) | True | G1717791 |
| TU1968058 | lncRNA | downstream | 657 | 23262295 ~ 23262494 (+) | True | G1717792 |
| TU1968060 | lncRNA | downstream | 4658 | 23266296 ~ 23266686 (+) | True | G1717794 |
| TU1968066 | lncRNA | downstream | 13093 | 23274731 ~ 23275055 (+) | True | G1717800 |
| TU1968089 | lncRNA | downstream | 67951 | 23329589 ~ 23330057 (+) | True | G1717822 |
| XM_021577164.2 | mRNA | upstream | 40570 | 23218944 ~ 23220765 (+) | True | ascl1a |
| XM_021577163.2 | mRNA | upstream | 71679 | 23164105 ~ 23189656 (+) | True | LOC110500046 |
| XM_021577162.2 | mRNA | upstream | 100662 | 23157083 ~ 23160673 (+) | False | klhl42 |
| XM_021577156.2 | mRNA | upstream | 156329 | 23100978 ~ 23105006 (+) | True | amdhd1 |
| NM_001160558.1 | mRNA | upstream | 160519 | 23099028 ~ 23100816 (+) | False | ruxf |
| XM_021577165.2 | mRNA | downstream | 34145 | 23295783 ~ 23313876 (+) | True | LOC110500049 |
| XM_021577167.2 | mRNA | downstream | 52697 | 23314335 ~ 23327014 (+) | True | th2 |
| XM_036958469.1 | mRNA | downstream | 79550 | 23341188 ~ 23353769 (+) | True | LOC110500052 |
| XM_036957345.1 | mRNA | downstream | 131889 | 23393527 ~ 23397736 (+) | True | LOC110500056 |
| XM_036957346.1 | mRNA | downstream | 143824 | 23405462 ~ 23423738 (+) | False | LOC110500058 |
| TU1968049 | other | upstream | 4523 | 23256126 ~ 23256812 (+) | False | G1717785 |
| TU1968048 | other | upstream | 4523 | 23256366 ~ 23256812 (+) | True | G1717785 |
| TU1967919 | other | upstream | 160526 | 23099015 ~ 23100809 (+) | False | ruxf |
| TU1967920 | other | upstream | 160704 | 23099015 ~ 23100631 (+) | True | ruxf |
| TU1967841 | other | upstream | 238571 | 23014806 ~ 23022764 (+) | True | LOC110500038 |
| TU1969665 | other | downstream | 811767 | 24073405 ~ 24074448 (+) | True | G1719225 |
| TU1969708 | other | downstream | 874126 | 24135764 ~ 24136323 (+) | True | G1719268 |
| TU1969963 | other | downstream | 1016193 | 24277831 ~ 24294797 (+) | True | adm2a |
| TU1969980 | other | downstream | 1055000 | 24316638 ~ 24317538 (+) | True | LOC110500097 |
| TU1971493 | other | downstream | 2350178 | 25611816 ~ 25612268 (+) | True | G1720836 |
