Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1969321 |
| length | 297 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1718914 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23809211 ~ 23809507 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1969149 | lncRNA | upstream | 17896 | 23733069 ~ 23791315 (+) | True | LOC110500079 |
| TU1969176 | lncRNA | upstream | 100063 | 23708468 ~ 23709148 (+) | True | LOC118942913 |
| TU1969135 | lncRNA | upstream | 176113 | 23632899 ~ 23633098 (+) | True | G1718742 |
| TU1969132 | lncRNA | upstream | 181140 | 23627841 ~ 23628071 (+) | True | G1718739 |
| TU1969123 | lncRNA | upstream | 186827 | 23619105 ~ 23622384 (+) | True | LOC110500071 |
| TU1969370 | lncRNA | downstream | 34451 | 23843958 ~ 23844275 (+) | True | G1718963 |
| TU1969371 | lncRNA | downstream | 34904 | 23844411 ~ 23844769 (+) | True | G1718964 |
| TU1969372 | lncRNA | downstream | 35304 | 23844811 ~ 23845088 (+) | True | G1718965 |
| TU1969373 | lncRNA | downstream | 37626 | 23847133 ~ 23847769 (+) | True | G1718966 |
| TU1969410 | lncRNA | downstream | 72657 | 23882164 ~ 23882378 (+) | True | G1718998 |
| XM_021577232.2 | mRNA | upstream | 17904 | 23733010 ~ 23791307 (+) | False | LOC110500079 |
| XM_021577223.2 | mRNA | upstream | 77159 | 23711583 ~ 23732052 (+) | False | LOC110500077 |
| XR_005038743.1 | mRNA | downstream | 87461 | 23896968 ~ 23903687 (+) | True | LOC118943007 |
| XM_036957362.1 | mRNA | downstream | 100498 | 23910005 ~ 23936559 (+) | True | LOC110500082 |
| XM_021577240.2 | mRNA | downstream | 167166 | 23976673 ~ 23985903 (+) | False | rpap3 |
| XM_021577239.2 | mRNA | downstream | 170978 | 23980485 ~ 23985903 (+) | False | rpap3 |
| XM_021577241.2 | mRNA | downstream | 171893 | 23981400 ~ 23985903 (+) | False | rpap3 |
| TU1968049 | other | upstream | 552399 | 23256126 ~ 23256812 (+) | False | G1717785 |
| TU1968048 | other | upstream | 552399 | 23256366 ~ 23256812 (+) | True | G1717785 |
| TU1967919 | other | upstream | 708402 | 23099015 ~ 23100809 (+) | False | ruxf |
| TU1967920 | other | upstream | 708580 | 23099015 ~ 23100631 (+) | True | ruxf |
| TU1967841 | other | upstream | 786447 | 23014806 ~ 23022764 (+) | True | LOC110500038 |
| TU1969665 | other | downstream | 263898 | 24073405 ~ 24074448 (+) | True | G1719225 |
| TU1969708 | other | downstream | 326257 | 24135764 ~ 24136323 (+) | True | G1719268 |
| TU1969963 | other | downstream | 468324 | 24277831 ~ 24294797 (+) | True | adm2a |
| TU1969980 | other | downstream | 507131 | 24316638 ~ 24317538 (+) | True | LOC110500097 |
| TU1971493 | other | downstream | 1802309 | 25611816 ~ 25612268 (+) | True | G1720836 |
