Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1969537 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1719117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23952575 ~ 23952897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1969532 | lncRNA | upstream | 502 | 23947696 ~ 23952073 (+) | True | G1719112 |
| TU1969522 | lncRNA | upstream | 12889 | 23939367 ~ 23939686 (+) | True | G1719102 |
| TU1969410 | lncRNA | upstream | 70197 | 23882164 ~ 23882378 (+) | True | G1718998 |
| TU1969373 | lncRNA | upstream | 104806 | 23847133 ~ 23847769 (+) | True | G1718966 |
| TU1969372 | lncRNA | upstream | 107487 | 23844811 ~ 23845088 (+) | True | G1718965 |
| TU1969541 | lncRNA | downstream | 2783 | 23955680 ~ 23956003 (+) | True | G1719121 |
| TU1969542 | lncRNA | downstream | 4614 | 23957511 ~ 23958195 (+) | True | G1719122 |
| TU1969569 | lncRNA | downstream | 23950 | 23976847 ~ 23977071 (+) | True | G1719147 |
| TU1969572 | lncRNA | downstream | 26237 | 23979134 ~ 23979603 (+) | True | G1719150 |
| TU1969575 | lncRNA | downstream | 35457 | 23988354 ~ 23988649 (+) | True | G1719153 |
| XM_036957362.1 | mRNA | upstream | 16016 | 23910005 ~ 23936559 (+) | True | LOC110500082 |
| XR_005038743.1 | mRNA | upstream | 48888 | 23896968 ~ 23903687 (+) | True | LOC118943007 |
| XM_021577232.2 | mRNA | upstream | 161268 | 23733010 ~ 23791307 (+) | False | LOC110500079 |
| XM_021577226.2 | mRNA | upstream | 220523 | 23712001 ~ 23732052 (+) | False | LOC110500077 |
| XM_021577240.2 | mRNA | downstream | 23776 | 23976673 ~ 23985903 (+) | False | rpap3 |
| XM_021577239.2 | mRNA | downstream | 27588 | 23980485 ~ 23985903 (+) | False | rpap3 |
| XM_021577241.2 | mRNA | downstream | 28503 | 23981400 ~ 23985903 (+) | False | rpap3 |
| XM_021577242.2 | mRNA | downstream | 28566 | 23981463 ~ 23985903 (+) | True | rpap3 |
| XM_021577256.2 | mRNA | downstream | 194146 | 24147043 ~ 24157840 (+) | True | LOC110500093 |
| TU1968049 | other | upstream | 695763 | 23256126 ~ 23256812 (+) | False | G1717785 |
| TU1968048 | other | upstream | 695763 | 23256366 ~ 23256812 (+) | True | G1717785 |
| TU1967919 | other | upstream | 851766 | 23099015 ~ 23100809 (+) | False | ruxf |
| TU1967920 | other | upstream | 851944 | 23099015 ~ 23100631 (+) | True | ruxf |
| TU1967841 | other | upstream | 929811 | 23014806 ~ 23022764 (+) | True | LOC110500038 |
| TU1969665 | other | downstream | 120508 | 24073405 ~ 24074448 (+) | True | G1719225 |
| TU1969708 | other | downstream | 182867 | 24135764 ~ 24136323 (+) | True | G1719268 |
| TU1969963 | other | downstream | 324934 | 24277831 ~ 24294797 (+) | True | adm2a |
| TU1969980 | other | downstream | 363741 | 24316638 ~ 24317538 (+) | True | LOC110500097 |
| TU1971493 | other | downstream | 1658919 | 25611816 ~ 25612268 (+) | True | G1720836 |
