Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1976590 |
| length | 310 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1725438 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 30130753 ~ 30131062 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1976588 | lncRNA | upstream | 1623 | 30128864 ~ 30129130 (+) | True | G1725436 |
| TU1976584 | lncRNA | upstream | 5869 | 30124673 ~ 30124884 (+) | True | G1725432 |
| TU1976534 | lncRNA | upstream | 55550 | 30073456 ~ 30075203 (+) | True | cin |
| TU1976498 | lncRNA | upstream | 171462 | 29959083 ~ 29959291 (+) | True | G1725360 |
| TU1976494 | lncRNA | upstream | 174871 | 29955519 ~ 29955882 (+) | True | G1725356 |
| TU1976595 | lncRNA | downstream | 12724 | 30143786 ~ 30181651 (+) | True | G1725440 |
| TU1976574 | lncRNA | downstream | 33114 | 30164176 ~ 30166516 (+) | True | LOC110500212 |
| TU1976627 | lncRNA | downstream | 70536 | 30201598 ~ 30203607 (+) | True | G1725464 |
| TU1976637 | lncRNA | downstream | 94908 | 30225970 ~ 30226172 (+) | True | G1725474 |
| TU1976638 | lncRNA | downstream | 95609 | 30226671 ~ 30226875 (+) | True | G1725475 |
| XM_036957596.1 | mRNA | upstream | 17574 | 30099370 ~ 30113179 (+) | True | LOC110501059 |
| NM_001160580.1 | mRNA | upstream | 55573 | 30073447 ~ 30075180 (+) | False | cin |
| XM_036957593.1 | mRNA | upstream | 121167 | 30002404 ~ 30009586 (+) | False | LOC110500210 |
| XM_036957594.1 | mRNA | upstream | 121167 | 30002404 ~ 30009586 (+) | True | LOC110500210 |
| XM_021577425.2 | mRNA | upstream | 128699 | 29993445 ~ 30002054 (+) | True | LOC110500209 |
| XR_005038434.1 | mRNA | downstream | 11 | 30131073 ~ 30135545 (+) | True | LOC110500214 |
| XM_021577430.2 | mRNA | downstream | 4564 | 30135626 ~ 30138363 (+) | False | LOC110500213 |
| XM_021577431.2 | mRNA | downstream | 4583 | 30135645 ~ 30138363 (+) | True | LOC110500213 |
| XM_021577428.2 | mRNA | downstream | 8011 | 30139073 ~ 30166652 (+) | False | LOC110500212 |
| XM_021577429.2 | mRNA | downstream | 8065 | 30139127 ~ 30166652 (+) | False | LOC110500212 |
| TU1976442 | other | upstream | 238796 | 29890286 ~ 29891957 (+) | True | G1725312 |
| TU1975334 | other | upstream | 870824 | 29258260 ~ 29259929 (+) | False | G1724262 |
| TU1975333 | other | upstream | 870824 | 29258661 ~ 29259929 (+) | True | G1724262 |
| TU1975332 | other | upstream | 870888 | 29258661 ~ 29259865 (+) | False | G1724262 |
| TU1975302 | other | upstream | 916470 | 29212819 ~ 29214283 (+) | True | G1724234 |
| TU1977415 | other | downstream | 450940 | 30582002 ~ 30590636 (+) | True | G1726209 |
| TU1977430 | other | downstream | 474238 | 30605300 ~ 30611361 (+) | False | G1726222 |
| TU1977431 | other | downstream | 474238 | 30605300 ~ 30611361 (+) | True | G1726222 |
| TU1977723 | other | downstream | 750781 | 30881843 ~ 30883613 (+) | True | LOC110500226 |
| TU1978141 | other | downstream | 1009535 | 31140597 ~ 31141090 (+) | True | G1726863 |
