Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1978429 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G1727143 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31447849 ~ 31448075 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1978370 | lncRNA | upstream | 126969 | 31320279 ~ 31320880 (+) | True | G1727084 |
| TU1978340 | lncRNA | upstream | 159669 | 31287977 ~ 31288180 (+) | True | G1727055 |
| TU1978335 | lncRNA | upstream | 163345 | 31284093 ~ 31284504 (+) | True | G1727050 |
| TU1978334 | lncRNA | upstream | 163760 | 31283835 ~ 31284089 (+) | True | G1727049 |
| TU1978236 | lncRNA | upstream | 197070 | 31248097 ~ 31250779 (+) | True | G1726957 |
| TU1978433 | lncRNA | downstream | 8094 | 31456169 ~ 31456407 (+) | True | G1727147 |
| TU1978434 | lncRNA | downstream | 8949 | 31457024 ~ 31463251 (+) | True | G1727148 |
| TU1978441 | lncRNA | downstream | 19110 | 31467185 ~ 31467721 (+) | True | G1727154 |
| TU1978443 | lncRNA | downstream | 23444 | 31471519 ~ 31471810 (+) | True | G1727156 |
| TU1978445 | lncRNA | downstream | 25820 | 31473895 ~ 31474128 (+) | True | G1727158 |
| XM_021577488.2 | mRNA | upstream | 11010 | 31427827 ~ 31436839 (+) | False | LOC110500239 |
| XM_036957653.1 | mRNA | upstream | 11010 | 31427827 ~ 31436839 (+) | True | LOC110500239 |
| trnaa-ugc-149 | mRNA | upstream | 343637 | 31104142 ~ 31104212 (+) | True | trnaa-ugc-149 |
| XM_021577485.2 | mRNA | upstream | 382198 | 31046036 ~ 31065651 (+) | False | LOC110500235 |
| XM_036957654.1 | mRNA | downstream | 16177 | 31464252 ~ 31465847 (+) | True | LOC118942919 |
| XM_021577489.2 | mRNA | downstream | 45387 | 31493462 ~ 31497830 (+) | False | LOC110500240 |
| XM_021577490.2 | mRNA | downstream | 45387 | 31493462 ~ 31497830 (+) | True | LOC110500240 |
| XM_021577492.2 | mRNA | downstream | 120320 | 31568395 ~ 31589029 (+) | True | tmem168a |
| XM_021577498.2 | mRNA | downstream | 232865 | 31680940 ~ 31684896 (+) | True | LOC110500245 |
| TU1978141 | other | upstream | 306759 | 31140597 ~ 31141090 (+) | True | G1726863 |
| TU1977723 | other | upstream | 564236 | 30881843 ~ 30883613 (+) | True | LOC110500226 |
| TU1977430 | other | upstream | 836488 | 30605300 ~ 30611361 (+) | False | G1726222 |
| TU1977431 | other | upstream | 836488 | 30605300 ~ 30611361 (+) | True | G1726222 |
| TU1977415 | other | upstream | 857213 | 30582002 ~ 30590636 (+) | True | G1726209 |
| TU1978432 | other | downstream | 1321 | 31449396 ~ 31450117 (+) | True | G1727146 |
| TU1978468 | other | downstream | 59981 | 31508056 ~ 31508372 (+) | True | G1727181 |
| TU1978507 | other | downstream | 116060 | 31564135 ~ 31564594 (+) | True | G1727220 |
| TU1979347 | other | downstream | 666661 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1979348 | other | downstream | 687880 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
