Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1978452 |
| length | 281 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1727165 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31482003 ~ 31482283 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1978445 | lncRNA | upstream | 7875 | 31473895 ~ 31474128 (+) | True | G1727158 |
| TU1978443 | lncRNA | upstream | 10193 | 31471519 ~ 31471810 (+) | True | G1727156 |
| TU1978441 | lncRNA | upstream | 14282 | 31467185 ~ 31467721 (+) | True | G1727154 |
| TU1978434 | lncRNA | upstream | 18752 | 31457024 ~ 31463251 (+) | True | G1727148 |
| TU1978433 | lncRNA | upstream | 25596 | 31456169 ~ 31456407 (+) | True | G1727147 |
| TU1978424 | lncRNA | downstream | 9233 | 31491516 ~ 31492308 (+) | True | G1727138 |
| TU1978427 | lncRNA | downstream | 17720 | 31500003 ~ 31500317 (+) | True | G1727141 |
| TU1978463 | lncRNA | downstream | 19695 | 31501978 ~ 31502194 (+) | True | G1727176 |
| TU1978469 | lncRNA | downstream | 26235 | 31508518 ~ 31508749 (+) | True | G1727182 |
| TU1978471 | lncRNA | downstream | 30424 | 31512707 ~ 31512922 (+) | True | G1727184 |
| XM_036957654.1 | mRNA | upstream | 16156 | 31464252 ~ 31465847 (+) | True | LOC118942919 |
| XM_021577488.2 | mRNA | upstream | 45164 | 31427827 ~ 31436839 (+) | False | LOC110500239 |
| XM_036957653.1 | mRNA | upstream | 45164 | 31427827 ~ 31436839 (+) | True | LOC110500239 |
| trnaa-ugc-149 | mRNA | upstream | 377791 | 31104142 ~ 31104212 (+) | True | trnaa-ugc-149 |
| XM_036957633.1 | mRNA | upstream | 416352 | 31050294 ~ 31065651 (+) | True | LOC110500235 |
| XM_021577489.2 | mRNA | downstream | 11179 | 31493462 ~ 31497830 (+) | False | LOC110500240 |
| XM_021577490.2 | mRNA | downstream | 11179 | 31493462 ~ 31497830 (+) | True | LOC110500240 |
| XM_021577492.2 | mRNA | downstream | 86112 | 31568395 ~ 31589029 (+) | True | tmem168a |
| XM_021577498.2 | mRNA | downstream | 198657 | 31680940 ~ 31684896 (+) | True | LOC110500245 |
| XM_021577494.2 | mRNA | downstream | 203124 | 31685407 ~ 31736831 (+) | False | LOC110500244 |
| TU1978432 | other | upstream | 31886 | 31449396 ~ 31450117 (+) | True | G1727146 |
| TU1978141 | other | upstream | 340913 | 31140597 ~ 31141090 (+) | True | G1726863 |
| TU1977723 | other | upstream | 598390 | 30881843 ~ 30883613 (+) | True | LOC110500226 |
| TU1977430 | other | upstream | 870642 | 30605300 ~ 30611361 (+) | False | G1726222 |
| TU1978468 | other | downstream | 25773 | 31508056 ~ 31508372 (+) | True | G1727181 |
| TU1978507 | other | downstream | 81852 | 31564135 ~ 31564594 (+) | True | G1727220 |
| TU1979347 | other | downstream | 632453 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1979348 | other | downstream | 653672 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979380 | other | downstream | 675629 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
