Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1978739 |
| length | 346 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1727427 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 31600791 ~ 31601136 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1978511 | lncRNA | upstream | 32630 | 31567955 ~ 31568161 (+) | True | G1727224 |
| TU1978502 | lncRNA | upstream | 48002 | 31552493 ~ 31552789 (+) | True | G1727215 |
| TU1978491 | lncRNA | upstream | 67202 | 31533328 ~ 31533589 (+) | True | G1727204 |
| TU1978490 | lncRNA | upstream | 68536 | 31532018 ~ 31532255 (+) | True | G1727203 |
| TU1978487 | lncRNA | upstream | 72081 | 31528482 ~ 31528710 (+) | True | G1727200 |
| TU1978782 | lncRNA | downstream | 57219 | 31658355 ~ 31658590 (+) | True | G1727468 |
| TU1978794 | lncRNA | downstream | 77342 | 31678478 ~ 31678731 (+) | True | G1727480 |
| TU1979345 | lncRNA | downstream | 542028 | 32143164 ~ 32144886 (+) | True | LOC110501063 |
| TU1979404 | lncRNA | downstream | 596383 | 32197519 ~ 32220621 (+) | True | G1728051 |
| TU1979406 | lncRNA | downstream | 635185 | 32236321 ~ 32236640 (+) | False | G1728052 |
| XM_021577492.2 | mRNA | upstream | 11762 | 31568395 ~ 31589029 (+) | True | tmem168a |
| XM_021577489.2 | mRNA | upstream | 102961 | 31493462 ~ 31497830 (+) | False | LOC110500240 |
| XM_021577490.2 | mRNA | upstream | 102961 | 31493462 ~ 31497830 (+) | True | LOC110500240 |
| XM_036957654.1 | mRNA | upstream | 134944 | 31464252 ~ 31465847 (+) | True | LOC118942919 |
| XM_021577488.2 | mRNA | upstream | 163952 | 31427827 ~ 31436839 (+) | False | LOC110500239 |
| XM_021577498.2 | mRNA | downstream | 79804 | 31680940 ~ 31684896 (+) | True | LOC110500245 |
| XM_021577494.2 | mRNA | downstream | 84271 | 31685407 ~ 31736831 (+) | False | LOC110500244 |
| XM_021577495.2 | mRNA | downstream | 91150 | 31692286 ~ 31736831 (+) | False | LOC110500244 |
| XM_021577496.2 | mRNA | downstream | 93895 | 31695031 ~ 31736831 (+) | False | LOC110500244 |
| XM_021577497.2 | mRNA | downstream | 110067 | 31711203 ~ 31736831 (+) | True | LOC110500244 |
| TU1978507 | other | upstream | 36197 | 31564135 ~ 31564594 (+) | True | G1727220 |
| TU1978468 | other | upstream | 92419 | 31508056 ~ 31508372 (+) | True | G1727181 |
| TU1978432 | other | upstream | 150674 | 31449396 ~ 31450117 (+) | True | G1727146 |
| TU1978141 | other | upstream | 459701 | 31140597 ~ 31141090 (+) | True | G1726863 |
| TU1977723 | other | upstream | 717178 | 30881843 ~ 30883613 (+) | True | LOC110500226 |
| TU1979347 | other | downstream | 513600 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1979348 | other | downstream | 534819 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979380 | other | downstream | 556776 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1980944 | other | downstream | 1720317 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1981477 | other | downstream | 2108956 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
